-
**Submitting author:** @po60nani (Houman Mirzaalian Dastjerdi)
**Repository:** https://github.com/SandoghdarLab/PiSCAT
**Branch with paper.md** (empty if default branch): JOSS-paper
**Version:** 0.1.2…
-
A case that is commonly encountered in molecular biology articles is the description of molecular entities with covalent modifications to one or more of their residues/monomers. The most common case i…
-
Hi Dear Alexey,
I am looking for a method to embed mutated protein sequences to vectors. I read through ELASPIC2 Affinity Demo notebook and especially `model.analyze_mutation(mut, protein_affinit…
-
Hi Mario, after the installation I followed with the command gmx_MMPBSA_test to test all the examples and I encountered the error below, however I cannot identify the error in the installation steps
…
-
Hello,
I've been attempting to use SOMD for an ABFE calculation of MIF180 binding to macrophage inhibitory factor (MIF). MIF is a homotrimer composed of three chains, and MIF180 binds close to the …
-
PTN000950370 adds "ubiquinol-cytochrome-c reductase activity CONTRIBUTES_TO)" to members of the UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C (PTHR12119) family.
But thos…
sjm41 updated
3 years ago
-
### **Aptamer Sensors**
Giovanna Marrazza - DOI: 10.3390/bios7010005
**Aptamers**
- single-stranded DNA or short RNA sequences
- isolated in vitro from a library of synthetic oligonucleotides …
-
OK, Biolink 2.0 (6/1 release date) has various changes that will affect KG2:
- `GenomicEntity` becomes a mixin
- `NucleicAcidEntity` groups DNA, RNA, etc.
- `ChemicalSubstance` -> `SmallMolecule`…
-
Hello Jenniening,
I installed all the packages and dependencies according to the procedure mentioned in the "readme.md" file.
However, when I tried to run the first test command, the following err…
-
**Biosensor Recognition Elements
James P. Chambers, Bernard P. Arulanandam, Lean**
- Selective overview of molecular recognition elements, including receptors, enzymes, antibodies, nucleic acids…