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---
id: amici
version: 0.11.20
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_AMICI/d668cb6544e871157919ac2e4e0dd35764dae0bc/biosimulators.json
specificationsPatch:
…
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---
id: netpyne
version: 1.0.0.2
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/27c2c97bc9192984e719880a96c1c3d1b4611b72/biosimulators-netpyne.json
spec…
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Would it make sense to include the results and the vega figures into the folders that are zipped into the combine archive? Would make the repo a bit easier to navigate to keep everything in one folder…
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- [x] dev: 615b562c2f1add0daafd6d2e (tellurium)
- [ ] org: 61610ddf09e39101d573cbab (COBRApy)
- [ ] org: 61610e1ae3fd8649821315d3 (COBRApy)
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---
id: smoldyn
version: "2.67"
specificationsUrl: https://raw.githubusercontent.com/ssandrews/Smoldyn/bc24cdbef7fc1207830e0492b1837040bc39bbbb/biosimulators.json
specificationsPatch:
version: "2.67…
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---
id: neuron
version: 8.0.0
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/2f5ee2d7e53e5f47e98a260ac8dba1abb548c018/biosimulators-neuron.json
specificatio…
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(See email for complete spec and context)
All of the helper methods for model-level annotations need to be changed so that the subject is not the filename, but instead uses the metaid of the tag i…
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We realized that our use of W3CDTF was unnecessarily confusing. The correct, standard way of using this is as a type restriction on the string. This means that "add_date_created" needs to be changed. …
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Example: https://run.api.biosimulations.dev/run/60dcfd6af14a8929e410e130/download
This breaks the functionality of the COMBINE API, which relies on this.