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``` r
tnrs(query=c("Cnicothamnus lorentzii", "Barnadesia spinosa"), source="iPlant_TNRS")
```
``` r
Calling http://taxosaurus.org/retrieve/dd7eb23035003dd72782a22ead9f19aa
Error in out$names : $ oper…
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I is desirable that the command to run the pipeline is present in the PATH on the virtual machine such that it can be invoked from any directory
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The matches list for Primates has two elements, but they are the same. The problem is that applications will assume that there's an ambiguity when there isn't.
{u'context': u'Mammals',
u'governing_c…
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It seems that **treemachine** and **taxomachine** currently have most method URLs under the expected `v1/`, but some methods (those in the non-default plugin?) are shunted off to `ext/`. Is there some…
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taxize is terrific, very useful. However, when I use itis_terms with multiple names (300+) I frequently have problems. Three things tend to happen which I am unable to recover from. The most common is…
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Example:
``` r
tnrs_match_names("Heliconia sanctae-martae")
search_string unique_name approximate_match ott_id number_matches is_synonym
1
is_…
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The API documentation lists [`context_name` as one of the paramaters to pass on to `tnrs/match_names`](https://github.com/OpenTreeOfLife/opentree/wiki/Open-Tree-of-Life-APIs#match_names), but trying t…
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Some treemachine methods like to have node ids, but users may only have OTT ids. So the getNodeIDForottId method for converting one to the other should be documented.
Slightly unrelated - the TNRS ca…
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Yan Wong yan@pixie.org.uk via googlegroups.com
8:28 AM (1 hour ago)
to opentreeoflife Unsubscribe
From https://github.com/OpenTreeOfLife/opentree/wiki/Open-Tree-of-Life-APIs#match_names
curl -X POS…
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contextQueryForNames does more thorough fuzzy matching. I think that autocompleteBoxQuery assumes that the first part of the string is an exact match.