ropensci taxize issues - Githubissues

ropensci / taxize

A taxonomic toolbelt for R

https://docs.ropensci.org/taxize

Other

264 stars 58 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Error: Not Found (HTTP 404) using `scrapnames` function

#933 nickbond opened 1 month ago
0
incorrect taxonomy from "POW" functions

#932 msedaghatpour opened 1 month ago
0
sci2comm Error URL rejected: Malformed input to a URL function

#931 Kavega closed 1 month ago
7
Error in { : task 1 failed - "Bad Gateway (HTTP 502)" (TROPICOS)

#930 ggrittz opened 2 months ago
0
error class2tree output

#929 jrigbr opened 2 months ago
1
Error in retrieving GBIF backbone taxon ID using `get_gbifid()`

#928 OndrejMottl opened 2 months ago
1
Running classification() in R markdown doesn't show options when multiple UIDs are found

#927 JacobyBaker opened 4 months ago
0
Add rworkflows

#926 bschilder closed 1 month ago
1
classification() unable to find NCBI accession number known to exist in database

#925 aubreyodom closed 5 months ago
2
R CMD Check cannot run via GitHub Actions because of untagged version

#924 cpauvert opened 6 months ago
7
continue ncbi_downstream() for loop even when one taxon generates error?

#923 nvpatin opened 6 months ago
0
taxize::synonyms return error "The `x` argument of `as_tibble()` can't be missing as of tibble 3.0.0."

#922 gledits2 opened 7 months ago
7
get_tsn() Error with tibble >= 3.0

#921 rix133 opened 7 months ago
1
`gnr_resolve` not matching the same name multiple times OR matches erroneously

#920 ErikKusch opened 7 months ago
0
Error 204 halts entire process rather than skipping taxon

#919 mkmor closed 7 months ago
2
Is there a function in taxize for getting all genera in a family?

#918 monis4567 closed 4 months ago
2
taxize had controversy outputs

#917 karolazvdo opened 10 months ago
0
HTTP 400 Error when using Taxize

#916 namon1994 opened 1 year ago
1
HTTP 503 gnr_resolve function

#915 robson-cruz closed 1 year ago
6
Bad Gateway (HTTP 502) in get_iucn

#914 Nicolescm closed 1 year ago
6
R taxize gnr_resolve function Internal Server Error (HTTP 500) for specific name

#913 abergelm opened 1 year ago
0
get_tsn() function failing to retreive data

#912 giligone closed 1 year ago
4
Fix the encoding issue in gnr_resolve (update to taxize_capwords)

#911 salix-d closed 1 year ago
0
Update to bold::bold_tax_id()

#910 salix-d opened 1 year ago
1
bug: NA returned by get_uid when using division_filter

#909 davised opened 1 year ago
3
Could taxize do without {conditionz}?

#908 maelle closed 1 year ago
6
Taxize always produce an API error after running for 1-2h+

#907 GossypiumH opened 1 year ago
4
taxize::classification() output list of possible IDs as an object

#906 EmilyMarkowitz-NOAA opened 1 year ago
2
Bad taxize book link in README

#905 EmilyMarkowitz-NOAA opened 1 year ago
2
gnr_resolve breaks when there is multibyte characters

#904 zachary-foster opened 1 year ago
2
Change to new cran checks badge URL

#903 sckott closed 1 year ago
3
Wrapping raise_for_status() section with a try() statement

#902 bomeara closed 1 year ago
2
Classification fails randomly

#901 bomeara closed 1 year ago
1
How to resolve NatureServe and GBIF names

#900 mikeroswell opened 1 year ago
1
taxize package, gnr_resolve() , Error: Request Entity Too Large (HTTP 413)

#899 TimWOceanSciences opened 1 year ago
1
How to add new datasets

#898 derek-corcoran-barrios opened 1 year ago
1
Fix pkgdown configuration for reference

#897 maelle closed 1 year ago
4
Error: {"error":"API rate limit exceeded","api-key":"85.250.39.10","count":"4","limit":"3"}

#896 Noa164 closed 1 year ago
2
Error: Service Unavailable (HTTP 503) for gnr_datasources()

#895 jtmiller28 closed 1 year ago
2
HTTP 404 error for get_tsn()

#894 rewcook opened 1 year ago
2
Migrating name reconciliation and resolution to https://github.com/gnames/gnames

#893 dimus opened 2 years ago
4
tp_search() returns 'names' attribute length error

#892 aspidoscelis closed 2 years ago
3
classification(sci_id = '[species name]', db = 'worms') not working

#891 EmilyMarkowitz-NOAA closed 1 year ago
2
automatically pick a result when multiple hits returned? classification()

#890 toczydlowski opened 2 years ago
7
unclear why genus is being outputed in matched_name2 when two data sources do not include the species.

#889 jtmiller28 closed 1 year ago
3
Misplaced elements in output of taxize::classification for a vector containing a mix of valid/invalid NCBI taxids

#887 sdgamboa closed 2 years ago
3
Add Global Names Verifier as a source and deprecate Global Names Resolver

#886 Rekyt opened 2 years ago
0
Downto error

#885 rogmei opened 2 years ago
1
Can EPPO be added as 'taxize' data source?

#884 r-scotti opened 2 years ago
0
update vcr fixtures and some tests

#883 zachary-foster closed 2 years ago
0