-
BIDS is a useful way to organize brain imaging data but there appears to not yet be a convention on how to name the runs in the scanner before the data is put into the BIDS format. This is important b…
-
If a file is already present, the conversion will fail, so if ses-1 is present, ses-2 will fail on a new conversion. Either add overwrite flag or try-catch statement
-
Hello :D
Me and a guildy tryed out the DKP addon on BFA, just to test it alittle.
We are getting Out of date etc and cant find a way to Update anything we have done.
Should there be only 1 person w…
-
Hi,
When I'm trying to use heudiconv with the '-p' flag, I get the following error (it works properly without using this flag):
INFO: Need to process 1 study sessions
INFO: PROCESSING STARTS: …
-
tnet.make_parcellation(parcellation,removeconfounds=True,parc_type='region',parc_params=nilearn_params)
No (static) network community file found.
Process Process-12:
Traceback (most recent call l…
-
I will try to point an issue on example:
First i run docker hediconv with flag convertall-> get dicominfo.tsv and manually extract parameters from .tsv to heuristic.
2)Then i compose heurs…
-
### Summary
[convertall.txt](https://github.com/nipy/heudiconv/files/3133359/convertall.txt)
I am attempting to use Heudiconv to convert an older dataset in our lab. All sequences were run…
-
Dear Heudiconv's experts,
I have run heudiconv docker image on FDG PET data with the following command line et execution message:
```
docker run --rm -it -v /Users/mattvan83/fMRIprep/COMAJ:/data:…
-
Please edit, what are possible values (if there are limited choices), what is it used for:
- anon_subject
*anonymized subject ID. To be used for conversion if `spec2bids` is called with `--anony…
-
Hi,
In testing my BIDS -> NIDM converter on an openfmri dataset retrieved using datalad, I find that the get_metadata function searches the .git directory embedded in the dataset. I've changed my co…