psychoinformatics-de datalad-hirni issues

psychoinformatics-de / datalad-hirni

DataLad extension for (semi-)automated, reproducible processing of (medical/neuro)imaging data

http://datalad.org

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issues

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Putting hirni to rest for now

#203 bpoldrack closed 2 years ago
0
lots of tests failing due to: 'origin' does not appear to be a git repository

#202 yarikoptic opened 2 years ago
1
AnnexBatchCommandError when performing hirni-import-dcm

#201 m-petersen opened 3 years ago
4
BF:Docs: replace incorrect dashes with spaces in command names

#200 loj opened 3 years ago
0
Documentation: commands contain incorrect dashes

#199 loj opened 3 years ago
0
Datasets interfere with each other when using pytest

#198 manuelakuhn opened 3 years ago
0
Raise dependency on datalad

#197 bpoldrack opened 3 years ago
0
Option to reset studyspec.json

#196 manuelakuhn opened 3 years ago
3
Using `--to-git` breaks `git diff` functionality

#195 manuelakuhn opened 3 years ago
5
Use default heuristics if required entries are not set in rule file

#194 manuelakuhn opened 3 years ago
1
Rule template is not a minimum working example

#193 manuelakuhn opened 3 years ago
2
Conversion fails without error but no conversion data

#192 manuelakuhn opened 3 years ago
3
dicom2spec result not deterministic

#191 manuelakuhn closed 3 years ago
2
Manual meta-aggregate needed for dicom conversion

#190 manuelakuhn opened 3 years ago
4
Manually modified dataset_description.json not seen in webapp

#189 manuelakuhn opened 3 years ago
0
Adding author via webapp breaks bids-validator

#188 manuelakuhn opened 3 years ago
2
Change dataset_desciption formatting

#187 manuelakuhn closed 3 years ago
1
dataset_description.json formatting is strange

#186 manuelakuhn closed 3 years ago
0
DOC: demo_reproducibility.rst: Update download-url call

#185 kyleam closed 3 years ago
1
failed to retrieve content from remote

#184 lsempf closed 3 years ago
6
unable to drop sourcedate after hirni-spec2bids

#183 pvavra closed 3 years ago
3
why does the disk-usage double for an installed sourcedata?

#182 pvavra opened 3 years ago
9
metadata extraction step fails on reimport of acquisition after manual delete

#181 pvavra opened 3 years ago
2
Converting two subjects/acquisitions fails on the second one

#180 manuelakuhn closed 3 years ago
12
repeated call of spec4anything for a file will add create repeat entries

#179 pvavra opened 3 years ago
7
RF: Make use of datalad's build helper

#178 bpoldrack closed 3 years ago
0
underscores in procedure name leads to call-format being ignored

#177 pvavra opened 3 years ago
2
spec4anything does not work for file in dataset-root

#176 pvavra opened 3 years ago
1
Formatting of docs does not clearly distinguish between single and double dash

#175 pvavra closed 3 years ago
1
Addressing issue 173

#174 bpoldrack opened 3 years ago
0
dicom2spec error due to checking for spec key "id" which does not exist

#173 pvavra opened 3 years ago
14
Prepare release 0.0.8

#172 bpoldrack closed 3 years ago
0
RF: replace deprecated datalad call

#171 bpoldrack closed 3 years ago
0
RF: prevent storage of metadata in dicom subdatasets

#170 loj opened 3 years ago
1
tests started to fail against datalad master

#169 yarikoptic closed 3 years ago
1
BF: modify template dataset_description.json

#168 loj closed 3 years ago
2
template dataset_description.json not BIDS compliant

#167 loj closed 3 years ago
0
Automatic creation of task-rest_events.tsv

#166 lsempf closed 3 years ago
1
Use of "datalad hirni-spec2bids --only-type" for physiological files

#165 lsempf closed 3 years ago
1
RF: Use call_git() in favor of _git_custom_command()

#164 mih closed 3 years ago
1
DICOM import problem

#163 lsempf closed 3 years ago
5
FR: webapp - visually represent "skip this acquisition"

#162 pvavra opened 3 years ago
0
use converter for two different inputs and create one output

#161 lsempf opened 3 years ago
0
Minor fixes

#160 bpoldrack closed 3 years ago
1
DEBUG: Investigate failing tests in datalad-extensions

#159 bpoldrack closed 4 years ago
4
Fails testing in datalad-extensions

#158 yarikoptic closed 3 years ago
4
make `datalad-recursiveinstall skip` default for sourcedata

#157 pvavra opened 4 years ago
1
running spec2bids without saved changes in sourcedata should throw a warning

#156 pvavra opened 4 years ago
4
Prepare minor release

#155 bpoldrack closed 4 years ago
0
dcm-Archive with non-dicoms leads to error

#154 TobiasKadelka opened 4 years ago
0