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We are not using the libcurl features, but it is stopping our installations looking for `curl-config`. We would like to be able to use PyBigWig without the system providing this binary. It is currentl…
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It seems the t-coffe node in KNIME is broken:
```console
2018-12-07 15:35:31,554 : DEBUG : KNIME-Worker-7 : NodeContainer : SeqanTcoffee : 2:1 : SeqanTcoffee 2:1 has new state: EXECUTING
2018-12-…
rrahn updated
5 years ago
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I am trying to install Pomoxis on MacOS Mojave. I have been able to solve all the other issues, except something related with gcc. I get error messages:
**1 warning and 1 error generated.
error:…
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I was wondering whether it is possible to interact with the database in a REST-like fashion? I would like to get the genomic position info for, say the gene`RBL2`. Is it possible to construct a URL to…
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Error reading ENCODE big bed files. E.g. https://www.encodeproject.org/experiments/ENCSR000ATN `ENCFF213XMK.bigBed`
```
[2017-11-20 15:40:40] GenomeBrowser [ERROR] Failed to preprocess track ENCFF21…
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Occurred during *.bb writing
```
Caused by: java.lang.IllegalArgumentException: n must be >0
at org.jetbrains.bio.big.ChromosomeInterval.slice$big(Interval.kt:105)
at org.jetbrains.bio.big.BigBe…
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To reproduce open chromhmm file: https://encodeproject.org/files/ENCFF564DYK/@@download/ENCFF564DYK.bigBed
I see tons of message in logs.
[2017-11-09 17:35:29] BigFile [WARN] AutoSQL queries are u…
olegs updated
6 years ago
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Hi, I have been trying to use the pip install command to download slamdunk onto my linux computer. I keep getting this error below and my install aborts. Any assistance would be greatly appreciated.
…
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Hi,
I'm trying to setup an instance of pileup.js - great package btw!
I was using the `ensGene.bb` file from the online demo but noticed that the gene coordinates were off from what I expected. Are …
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Hi,
trackDb.txt file is successfully generated as well as track associated metadata can be visualized, however rendering of bigWig/bigBed files fails due to permissions. I have ensured UCSC browser…