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pyBigWig
A python extension for quick access to bigWig and bigBed files
MIT License
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pyBigWig.c: fix build failure with gcc 14.
#151
emollier
opened
1 month ago
0
get np2 compatible
#150
WardDeb
closed
2 months ago
0
pyBigWig.entries() should return empty array, not None when no entries are found
#149
balwierz
opened
4 months ago
0
Out of memory listing entries on one human chromosome on a machine with 300 GB ram and 165 GB BigBed file
#148
balwierz
opened
4 months ago
1
'zsh: segmentation fault '
#147
violacimatti
closed
2 months ago
1
Stats Sum Not Working as Expected
#146
atancoder
closed
6 months ago
0
Simple patch to resolve conflict with roundup() macro
#145
outpaddling
opened
8 months ago
0
Issue Downloading pyBigWig
#144
tdb7dgr
closed
9 months ago
1
Support for python >=3.11
#143
CodingKaiser
opened
9 months ago
1
addHeader does not support multiple calls
#142
rlowe-altoslabs
opened
1 year ago
1
Installing through pip not working
#141
callum-b
closed
1 year ago
9
Add wheel to pypi upload in github actions
#140
EricR86
closed
1 year ago
3
Add MANIFEST.in
#139
dpryan79
closed
1 year ago
1
pip installation broken
#138
ABignaud
closed
1 year ago
4
Bump to 0.3.19
#137
dpryan79
closed
1 year ago
0
fix tests
#136
dpryan79
closed
1 year ago
0
Updated build and wheel distribution for pyBigWig
#135
EricR86
closed
1 year ago
4
Implement #133
#134
dpryan79
closed
1 year ago
2
Can't enforce numpy features when pyBigWig is used as a dependency in downstream package
#133
EricR86
closed
1 year ago
5
Writing a nan value should leave a gap
#132
rcasero
opened
1 year ago
7
pyBigWig fails to find numpy installation when installing from PyPI
#131
EricR86
closed
1 year ago
5
library import error
#130
chanwkimlab
closed
2 years ago
4
Create a BedGraph file using addEntries() throws segmentation fault
#129
priesgo
closed
2 years ago
2
numpy support broken in 0.3.18?
#128
francois-a
closed
2 years ago
1
support for osx-arm64
#127
phylyc
closed
2 years ago
2
Cannot add entries of value type int, but only float
#126
XikunZhang
opened
2 years ago
2
Document performance considerations?
#125
alexlenail
opened
2 years ago
4
RuntimeError: Invalid interval bounds
#124
Ankita-1211
closed
2 years ago
0
Suppress logging/error messages
#123
EricR86
opened
2 years ago
2
BigBed interval problem
#122
jtd032
opened
2 years ago
7
Update README.md
#121
BaselAbujamous
closed
2 years ago
1
Error Installing pyBigWig
#120
pzhang312
closed
2 years ago
11
1-based BigWig file as input
#119
dshan25
closed
2 years ago
2
Open bw file for appending?
#118
tncowart
closed
3 years ago
2
[bwGetOverlappingIntervalsCore] Got an error
#117
wuzhaoqi1015
closed
2 years ago
3
Remove unused "dev" stats option.
#116
nathancfox
closed
3 years ago
2
Update the pyBigWig.bigWigFile.stats docstring.
#115
nathancfox
closed
3 years ago
0
Issue installing on macOS: pyBigWig.c:6:10: fatal error: 'values.h' file not found
#114
kevlarr
closed
3 years ago
2
Write bigwig to BytesIO object
#113
joachimwolff
closed
3 years ago
4
Fix issue #111, handle empty files AND those with empty summaries.
#112
dpryan79
closed
3 years ago
0
File with incorrect header information read as empty
#111
dkoes
closed
3 years ago
4
error raised when start and end positions are identical.
#110
fardokhtsadat
closed
3 years ago
1
Problem installing pyBigWig
#109
hemantgujar
closed
3 years ago
3
Add poweron architecture ppc64le to travis build
#108
asellappen
closed
3 years ago
0
Support for GCP bucket access?
#107
francois-a
closed
3 years ago
2
Failure to install pyBigWig package in python3.8-buster container when numpy is installed
#106
blaiseli
closed
3 years ago
1
Mismatch in the magic number when trying to open bigwig file to fix chromosome names
#105
WimSpee
closed
4 years ago
2
What is "None" bigwig signal values mean from pyBigWig bw.stats?
#104
kac2053
closed
3 years ago
1
Python 3.8 support
#103
joachimwolff
closed
4 years ago
2
[bug/feature] easier installation and better cross-platform compatibility
#102
shouldsee
closed
4 years ago
6
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