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embedding jbrowse returns a blank page when opening windows in firefox, unless you go to devtools and select the link manually, then the element refreshes and the link is properly displayed. This has …
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Hello,
I have a few genome assemblies in progress (in the 2-3Gb range). This tool would be great but since these assemblies are highly fragmented (usually 150k to 300k scaffolds not assigned to any hi…
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On 10/17/2013 03:36 PM, Josie Reinhardt wrote:
> No good. Everything updated properly (the names of the tracks were
> different so I know it did). But the ESTs are still not searchable by name.
> …
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I've noticed that no matter how many cores are available on the CPU, this client seems to only use two per instance at full. Isn't Full supposed to use 100% of the CPU?
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It may be useful to provide 1,000 genomes as reference database for query/comparison or infer ethnicity
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Zooming out "too much" when using Alignments2 causes the browser to crash. Even when setting max_depth as low as 10. This is due to the huge amount of memory allocated: ~ 1.6 Gb seems to be the tippi…
ghost updated
11 years ago
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Also add a menu item to the general tool-bar on whether selections should be triggered or not.
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When the user uploads a large list of IDs, the list confirmation page may include tables of duplicates, synonyms, etc. These tables can grow arbitrarily large, which (i) take forever to load, (ii) eat…
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Hello,
I've been using Jellyfish 1.1.5 and, whenever I create a quake database (jf) and I try to create a stats, I get:
Invalid file type 'JFFSTQDN'.
Is it a bug or is it by design?
Regards and th…
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Previous title: minutes to load, and very slow, with fragmented genome assemblies
I wanted to use jBrowse to visualize a genome assembly I have in progress. It has around 400k small scaffolds totalin…