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The current approach with a World.tsv AND individual .tsv files for subcountries/cities is confusing (at least to me). I see that in covid19_scenarios/tools/collect_case_data_to_json.py, the files are…
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This may include:
- debounce `run()` calls
- hide feature behind the checkbox, disabled by default
Issues:
* `formik` does not allow to subscribe to the form state changes. It requires …
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Although type checking and linting was implemented in the app from the beginning, we disabled it early so that scientists could iterate faster without being bothered too much with the latest web dev n…
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Hello,
I have had an issue using my output from Roary with your tool. I have used both a 95 sample and smaller sample (n=10 with compliant GeneBank settings from Prokka-1.13.3) and had similar iss…
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This may include:
- Improve readme, add more details on how to run the app in dev and prod mode, in docker or without
- Add Contributing guide
- Add Code of conduct
- Add Issue templates
- A…
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The [tests in this project](https://github.com/mrc-ide/covid-sim/tree/master/tests), being limited to broad, "smoke test"-style assertions, do not support an assurance that the equations are being exe…
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Hi,
I am trying to use the mugration function and I am getting this error:
File "/Users/nartuhi/miniconda3/bin/treetime", line 12, in
return_code = params.func(params)
File "/Users/…
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Hello @nextstrain/portuguese!
The situation report from 2020-04-10 is ready to be translated to Portuguese. This week’s report is a little bit shorter than usual but hopefully still informative :…
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I went to do a very quick test of the latest `v6` just now, and I'm getting some slightly weird stuff - which seems to be related to the Deprecation warnings ([this commit](https://github.com/nextstra…
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@rneher why I could not find ancestral_reconstruction.py?
ghost updated
5 years ago