neherlab covid19_scenarios_data issues

neherlab / covid19_scenarios_data

Data preprocessing scripts and preprocessed data storage for COVID-19 Scenarios project

https://github.com/neherlab/covid19_scenarios

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issues

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Fix France parser according to PR#76

#78 Christian-G-UT closed 4 years ago
1
Fix bug with latest latest data for France not being processed

#76 Christian-G-UT closed 4 years ago
4
Feat/scenarios ode fit

#75 nnoll closed 4 years ago
1
Update hospital_capacity.csv

#73 MikaMaracuja closed 4 years ago
0
Update ICU_capacity.tsv

#72 MikaMaracuja closed 4 years ago
0
Update Israel parser with deaths/icus

#71 MaozGelbart closed 4 years ago
1
Add hospitalized and ICU when available for France

#70 Christian-G-UT closed 4 years ago
1
[Bug] CSV writer on windows will insert newlines

#69 thoo1 closed 4 years ago
4
Revised Tsv and parsing to JSON

#68 noleti closed 4 years ago
6
Simplify store_data() arguments, requirements on data passed

#67 noleti closed 4 years ago
2
Feature: Fit case data to ODE model for better scenarios.

#65 nnoll closed 4 years ago
0
Simplified declaration of hemisphere for scenarios

#64 noleti closed 4 years ago
2
China country and state level parser

#62 noleti closed 4 years ago
1
China country+state level parser

#61 noleti closed 4 years ago
1
🇮🇸 Iceland parser

#60 tryggvigy closed 4 years ago
1
[Question] parser for Iceland

#59 tryggvigy closed 4 years ago
1
Add 'epidemiology' key to population.json for the Epidemiology

#57 noleti closed 4 years ago
1
Initial Condition JSON needs to read out location of scenarios.

#56 nnoll closed 4 years ago
5
Israel cases parser and population data

#54 MaozGelbart closed 4 years ago
1
Sub mod path

#53 rneher closed 4 years ago
4
Add brazil at PopulationData.tsv

#52 gstvribs closed 4 years ago
1
Add data for canadian provinces/territories to populationData

#49 rcbevans closed 4 years ago
0
removed old wrong brazil folder, removed print statement from parser

#48 noleti closed 4 years ago
0
feat: cron

#47 hongaar closed 4 years ago
1
Inconsistent death count depending on simulation range

#46 nielsenko closed 4 years ago
1
adjust switzerland parser to use individuals cantonal files instead o…

#45 rneher closed 4 years ago
1
Fix France parser

#44 aschelch closed 4 years ago
1
parser for Brazil

#43 gabrielhomsi closed 4 years ago
1
🇨🇦 Canada parser

#42 noleti closed 4 years ago
4
french parser has multiple lines per day in .tsv

#41 noleti closed 4 years ago
2
feat: python script to dynamically generate population default scenarios for each region.

#40 nnoll closed 4 years ago
4
Directory `aux` breaks Windows

#39 ivan-aksamentov closed 4 years ago
1
Feat/initial condition json [pr: wip]

#38 nnoll closed 4 years ago
0
Chore/mv tools

#37 nnoll closed 4 years ago
0
🇨🇦 Add data from Canada

#36 ivan-aksamentov closed 4 years ago
12
🇳🇱 feat: add icu data for netherlands

#35 hongaar closed 4 years ago
6
🇽🇰 add population data for Kosovo

#33 agonhasani closed 4 years ago
3
🇨🇭 Swiss counts

#32 rneher closed 4 years ago
2
🇪🇸 Added hospitalized data source for Spain

#31 mserranom closed 4 years ago
3
Cleanup of general data storage in parsers

#30 noleti closed 4 years ago
1
🇧🇷 Add Brazil Scenarios

#29 gstvribs closed 4 years ago
3
fix: don't replace 0 with None

#28 noleti closed 4 years ago
1
Feat/fit initial numbers

#27 rneher closed 4 years ago
1
🇮🇳 updates to india parser

#26 noleti closed 4 years ago
2
🇩🇪 germany.py to pull data

#25 CWienbruch closed 4 years ago
2
🇪🇸 Added spanish regions to populationData.tsv

#24 mserranom closed 4 years ago
1
Streamline parsers and manual .tsv, Re issue #12

#23 noleti closed 4 years ago
11
Various improvements to runners

#22 dannysepler closed 4 years ago
3
🇩🇪 Data from Germany

#21 ivan-aksamentov closed 4 years ago
4
🇽🇰 add Kosovo to country codes

#20 agonhasani closed 4 years ago
1