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Probably 1,000 tips (or less). Provide link to information about installing local taxomachine db for those who might be interested in doing large requests.
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E.g., this fails
``` coffee
tnrs(query = mynames, getpost="POST")
Error : Expectation Failed
Error in names(tmp)
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Goal 2 from Kseniia's list, mentioned in https://github.com/ropensci/RNeXML/issues/21#issuecomment-25735531
Will be a good example for the manuscript, once gov't shutdown ends and the taxize servers…
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@hdliv, we can add TNRS contexts for microbial groups if you want to define some for me. Note, they _must_ be monophyletic groups in the taxonomy in order for the contexts to make sense. I just need t…
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See https://groups.google.com/forum/#!topic/opentreeoflife-software/raWZ7hSfUpI .
Argument would be an OTT id, e.g. as returned by TNRS. Result would be - I'm not sure, we need to decide this. If it w…
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I think most people would want to provide these as OTT ids (coming out of the TNRS), but I suppose internal graphdb node ids would make sense too.
See https://trello.com/c/fd2lr60r/48-extract-subtree…
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E.g. http://devtree.opentreeoflife.org/curator/study/view/ot_43
OTU Mappings
Start mapping
Clear all visible mappings
--> choices are still visible. they should be removed so that you can e.g. set t…
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Make a single access point for resolving names
Right now we have the following fxns explicitly meant for resolving names: `gnr_resolve()` and `tnrs()` In addition, theres `ResolveNames()` from `rPlan…
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On loading of a study into treemachine via pgloadind, add option to disregard taxon mapping, thereby setting treemachine to try out mapping using the existing TNRS functionality.
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On taxonomy import, taxomachine should read and store the contents of the about.json file from smasher. This should be available (presumably in the same format as the original about.json file) from a …