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While working on a study comparing different approaches to query the neXtProt dataset, I have observed that Virtuoso returns wrong results in some cases.
If I create the tables —
```
create tab…
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## BWA Short Reads
Bowtie2 is fast and has similar results to BWA but is generally regarded to have higher accuracy.
#### BWA modes
[From this guide](https://hbctraining.github.io/In-depth-NGS-Da…
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CentOS Linux 7
perl v5.26.2
gcc version 8.3.0
error:
++ pwd -P
+ ROOT=/lustre1/leili_pkuhpc/software/MaSuRCA-3.4.2
+ '[' -z '' ']'
+ DEST=/lustre1/leili_pkuhpc/software/MaSuRCA-3.4.2
+ mkdir…
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```
(venv) art@aziraphale:~/git/western-bioinfo.github.io$ bundle exec jekyll build
Configuration file: /home/art/git/western-bioinfo.github.io/_config.yml
To use retry middleware with Faraday v2.0…
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- [ ] Start w/ @the-mayer's `rmd` report
- [ ] Identify proteins to run through MolEvolvR
- [ ] Create case studies
- [ ] Which additional summarization/visualizations would help with these case s…
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Hi,
I am very happy to find this excellent tool to do k-mer statistics. However, I met some problems during compiling this software. I thought the problem might be due to newer operation system ve…
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## Motivation
To better understand how similar samples are, PCA is a good start.
However, there the current analysis is insufficient:
- first 3 PCs often do not separate all identified clusters,
…
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Hi BG7 Developers,
Thank you so much for making BG7 open source! I really like the idea behind BG7's annotation method!
Currently, I am running BG7 on _Listeria monocytogenes EDG e_ (sequence fasta …
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Hi,
It seems that the website http://bioen-compbio.bioen.illinois.edu/RACA/ is disabled. Could you please provide another way to get example data?
Thanks,
Huang
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Is there any plan to get these plugins integrated into the defaults for bcftools so we do not have to separately compile with them?
BEFH updated
6 months ago