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Figure 5: If I understand this figure correctly, the authors are using the BEAST MCC tree of each segment, looking at a particular point in the past, and counting the number of extant lineages that wo…
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> The paper uses a straightforward method for the bioinformatic inference of reassortment, but without much of a statistical evaluation or comparison with other methods. A number of comparable methods…
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The viruses used in this study may be collected from many different countries in different years. Are they good representatives of the two lineages of viruses that were co-circulating in the same loca…
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> The authors need to define their nomenclature regarding clade / lineage / type / strain. For instance, they say: "We find that 1 unit of antigenic drift within a clade increases incidence by 1.26 st…
trvrb updated
10 years ago
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The following is a screenshot of one run-through. I'm not sure what's going on yet but I think the `score()` function isn't returning the full alignment given that the score is probably not what is sh…
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Below snapshots which does not belong to my aws account but displays and tries to delete it when i run snapshot purging script.
snap-d010f6b9 Windows 2003 R2 Installation Media [Deprecated] - Enterpr…
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> Does a similar correlation analysis to the one shown in Fig. 4 find a relationship between estimated within-clade antigenic drift and excess P & I mortality attributed to influenza?
trvrb updated
11 years ago
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I absolutely love gMail's spell checker - it is elegant, out of the way, and looks very nice. Adopting that approach rather than a pop-up would be far nicer!
Also, it would be really nice if you cou…