-
Hi Rebecca,
thank you sharing your program! I am going through the tutorial and I can't find the tissue_expression_file: data/tissue_expression/GPL570EnsemblGeneExpressionPerTissue_DEPICT20130820_z_…
-
The RNA velocity toolkit refuses to estimate velocities for a lot of genes. How do you handle this in Scribe? Would it be reasonable to fill in a velocity of zero (constant expression)? Or do I need t…
-
New paper:
https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-4656-3
-
I'm not sure if this is a question better posed here or on image.sc so please just let me know if I should post it there instead.
So I have 3 color ISH tissue images with cells labeled (fairly bri…
-
Hi,
I have PK sim model, in which I had to scale partition coefficients (Interstitial : plasma & Intracellular : plasma) during model development. Now, If I want an individual PK simulation, then I…
-
Hello:
When I run the Mastermind extension, it adds the comments to the output file in this way and does not add any mastermind information, but fills its columns with "-".
What is this error? How c…
-
Leverage ideas from A-SHOP NORPAC Data Editor (NDE) and WCGOP OBSPROD Debriefing component, as well as McVeigh's excel proposed mockup.
ghost updated
5 years ago
-
Hi @mathieuboudreau @ileppe @tanguyduval
We previously discussed using Bloch simulations for some models (e.g. t1 and t2 fitting). I suggest using [Brian's simulator](http://mrsrl.stanford.edu/~br…
-
Hi,
I discussed with Romain (and other people) at the Single Cell Genomics conference whether it is possible to create a factor analysis version of scVI. The idea would be to let the variational in…
-
Submitting Author: Eric Brown (@eebrown)
Repository: https://github.com/eebrown/PET
Version submitted: 0.1.9
Editor: Melina Vidoni (@melvidoni)
Reviewer 1: Jon Clayden (@jonclayden)
Review…