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## Short description of the problem
KeyError: 'reaction_network_ko_annotations_hash' when running `anvi-reaction-network`
## anvi'o version
```
Anvi'o .......................................: …
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## Short description of the problem
Getting the following: ModuleNotFoundError: No module named 'sklearn.ensemble._forest'.
I tried installing this with pip, which says it can find it. This error…
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Hi Anvi'o developers!
## Short description of the problem
I've been trying to use the Ecophylo workflow (actually for now just to save the workflow graph) and I am getting errors concerning the `h…
hdore updated
9 months ago
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I recently found this issue 'https://github.com/merenlab/anvio/issues/632' which is still valid, but for other reasons.
For some reason 4 of my anvi-profile runs were killed:
"* Anvi'o profiler r…
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## Short description of the problem
`anvi-meta-pan-genome` yields config error 'no gene calls' because the gene caller is not prodigal but I cannot tell anvio to change the gene-caller.
## anvi'…
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## The need
It'd be nice to have an accompanying legend when exporting svgs of anvi'o figures that have used the intensity setting.
For example, here's a figure I'm looking at:
![image](https:…
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'Omics terms can be difficult to learn. Having them described in a single page may help new comers to overcome this barrier quickly and transfer knowhow that may be a pain to transfer through more for…
meren updated
2 years ago
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## Short description of the problem
In the interactive interface, we can search for items matching an operator formula. And it does not work with large numbers somewhat.
## anvi'o version
anv…
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## Short description of the problem
Just listing the script help for any jobs is taking 2-3 minutes on my machine. For example, I timed a couple of `-h` jobs (3x replicates):
```
anvi-display-p…
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Hello,
I am trying to import my VS2 results into anvio and it requires the final-viral-boundary tsv file, but the only outputs I got from my run were the final-viral-score.tsv and final-viral-combine…