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It is useful to know who is using scikit-image when planning funding proposals. I was looking a little into how one can extract information such as that presented in [GitHub's dependents view](https:/…
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I have been using the package to estimate cell proportions in bulk brain tissues and I noticed that I consistently get 0s for microglia in multiple different datasets. I also performed estimate on so…
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Hi @yunguan-wang,
I noticed in the manuscript it noted that parallel processing actually resulted in slower jobs (presumably implemented in R), but spacia.py has a worker pool. It appears to batch…
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Please check that the term does not already exist by using the ontology search tool OLS:
https://www.ebi.ac.uk/ols4/ontologies/cl
--> not available
**Preferred term label**
astrocyte-restricte…
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Hi @aanderson54 @jloupe
Thanks for the great resource!
Brain TF bed file downloaded from https://www.synapse.org/Synapse:syn51942384.5/datasets/
DLPFC tissue TF ASH2L have 4 files,DLPFC-NEG m…
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I think at some point I started defining the `N` variable in tempaltes everywhere before kernel call with
```cuda
const int _N = {{constant_or_scalar('N', variables['N'])}};
```
and then passing i…
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Hi,
Sorry to bother you again.
I'm having difficulties interpreting the provided differential expression values.
I took values from the ASD_DEGcombined.csv file, which seem to be coherent wit…
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Hello,
I'm a student from Heidelberg and we wanted to try out your program in our lab.
When trying to run the program in math lab there comes an error because of the tiffRead function.
Is there any…
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when i run this projection: https://nemoanalytics.org/projection.html?projection_algorithm=pca&multipattern_plots=0&projection_source=f61159d5&layout_id=f1b93141&projection_patterns=FC
for this dat…
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Hi,
could you please clarify how to run Differential Expression on the cell type specific data generated by reverseDecon ?
Below is what I did so far:
I followed the GeoMxWorkflows tutorial t…