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These are used by DSEO (https://docs.google.com/spreadsheets/d/1ix1eKplAX9KHbBsA6uU7G95_7lD5Q9jGfEL_LV7dYAQ/edit#gid=1477753083) and we could model them in EDAM:
- *Unsupervised learning*
- *Ense…
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I have mp4 files (about 1.5 mins long) of worms moving in a dish. I want to measure speed and use animal tracking which shouldn't be much different than drosophila larvae behavior tracking. I was able…
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It is useful to know who is using scikit-image when planning funding proposals. I was looking a little into how one can extract information such as that presented in [GitHub's dependents view](https:/…
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What I noticed about the NEUBIAS training resource
I’m Yusaku Ohta.
This resource, the NEUBIAS training resource, is really great, very informative.
I thought I knew these things very well, b…
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Does h2n5 have any advantage to be used for tiled image instead of cog ? I know h2n5 serve n5 dataset so my question is more about the advantages between n5 and cog.
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Dear ome team,
I recently came across an interesting use case. I have couple of microscopy software tools that export very large images as a series of .tiff (or .bpm, etc) files accompanied by a me…
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### Describe the Bug
Bio-Io reports that the size in the Z dimension is one less than the true number of Z levels. Tested on a ZARR with Z folder names from 0 to 108 (inclusive), so there should be 1…
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Hi @thewtex, I couldn't leave this on your branch, so am putting it here. First thing to say is that I'm very excited about this and getting another update during the Zarr meeting the other day was gr…
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Add the key principles of EDAM design that are not obvious, _e.g._:
* **What** and not **How** (and even if a bit of **how**, then only when absolutely necessary). If **how** is an expected search…
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Hi,
I have performed colony-forming assay using MDA-MB-231 cancer cells, which have a tendency to spread out during growth to form a monolayer, with a doubling time of around 36 hours. The assay l…
koeic updated
2 weeks ago