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We are interested to test your algorithm on spectral confocal images (Zeiss LSM 980 NIR). Can we test your algorithm with TIFF lambda images (35 images) and do you need individual spectrum or do you e…
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There are four types of data resolution: spatial, spectral, radiometric and temporal. Many instruments can capture one or two types of resolution simultaneously, yet it is rare to find equipment capab…
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Part 3 of the Web Viewer Brainstorming - following on from: https://github.com/openmicroscopy/design/issues/34
As these mockups go on, I am starting to run into problems with so many viewer options.
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Hi ,
i'm trying to use your script count_probes.py on Ubuntu but there is something wrong. The most errors (around 30 lines) i got concern the numpy module with this kind of message :
/home/user…
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I generated an ome.zarr file using the example image from ome-zarr-py:
https://gist.github.com/constantinpape/69e3cb8e0401621365d814b4d6fda0bc
However, in Windows 10, the file explorer views this …
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Hello, thank you for providing Cellpose3d!
After trying Cellpose3D on Windows, it worked.
However, after initialising the model as in the provided screenshot and supplying an input file,
the folder…
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Dear Mr. mkitti,
I followed your instruction provided and tried to run your code in MATLAB.
Unfortunately, it didn't work. In command window, it stated as follow;
>> performAnalysis
Unable to …
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| Preferred term label | Synonyms | Textual definition | Link to [CHARISMA Wiki equivalent](htt…
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https://github.com/labsyspharm/mcmicro-nf/issues/126
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Moving the discussion from the mail thread here:
Which measurement should we use for the final score?
- Currently, we use the mean intensity per cell. From what I understand, the best alternative wo…