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Hi!
Our team at ViQi Inc. have been doing ML analysis on the cpg0012 dataset with a lot of success. We would now like to move on to the jump dataset cpg0016 and possibly cpg0004. However, I cannot…
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Hi Jan, I'm trying to install CRISPRAnalyzer by command line, because the use of CRISPRAnalyzer installed by kitematic fail during the re-evaluation step and now I want to do the sgRNA Re-evaluation u…
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Now, I am comparing several genomes using their GFF3 files. To generate a GFF3 file, I ran DFAST-core with the genome sequence of CP003989.2 (Thioalkalivibrio nitratireducens DSM 14787) as an input fi…
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Thanks for making this tool available. It was recommended to me by a colleague. I'm new to this kind of analysis and was just curious about the advantages/disadvantages of this tool compared to the M…
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Share the papers that you've identified as relevant to our reproducibility discussion here. You do not need to note in this issue which ones fall into each category.
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**Describe the bug**
ERROR: list index out of range. This has never happened to me before. The files that I am performing the analysis on are new.
**Expected behavior**
Not ERROR: list index…
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This issue contains monthly updates to an automatically ranked list of PubMed papers as candidates for curation in the Bioregistry. Papers may be relevant in at least three ways:
(1) as a new prefix…
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We describe here the additional principles used to make the annotations more uniform in the release candidate.
* We merged `version-number` and `version-date` into a single `version` type. `versio…
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Today I focused on two different areas; using bacteria and diagnostic tools and different components of genetic circuits. I already knew about the paper based circuit design but figured id include it …
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#This is the collection of all microbial methylome analysis sources codes.
#(Saved for linking to future publications)