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The Moleculenet publication has accomplished much in terms of having standardized problems for supervised learning over chemical structures. However over the past couple of years we have seen some ba…
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Title: Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein
# General Information
## Please paste a link to the paper or a citation here:
Link: https://www.ncbi.nlm.ni…
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Some transformative reactions are able to have amplifying reactions when they should not, and vice versa. These are Hydro Swirl, which should not be able to Vaporize, and Burning, which should. (Edit:…
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Recently I've been thinking a bit about the future of big data in Electron Microscopy.
For the uninitiated: Due to increases in detector resolution and the increase of use of time-resolved EM, 4D …
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I usually organize my cryo-EM data based on relion recommendations. See section 2.1 of [Link](https://hpc.nih.gov/apps/RELION/relion31_tutorial.pdf).
For example, I put my tif files under Movies/10…
zruan updated
3 years ago
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### Setup
I am reporting a mmcif parsing problem with *Biopython version 1.78*, *Python version 3.8.10*. I am trying to retrieve resolution infomation for the mmcif files. But the mmcif parser retu…
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Hi there.
Is there any way running eval_model.py with CPUs?
I am getting the error message:
RuntimeError: Attempting to deserialize object on a CUDA device but torch.cuda.is_available() is Fa…
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# Insight Article (2 concerned articles)
http://elifesciences.org/content/3/e03678
Idea for future way of displaying:
- use lens-style single column view
- first instead of boxed-text we use a prom…
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@doi:10.1021/bi501056h
> We have employed molecular dynamics (MD)
simulation to investigate, with atomic details, the structural dynamics
and energetics of three major ATPase states (ADP, APO, and …
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Hi,
I have downloaded the EMPIAR 10049 data following this link: https://github.com/zhonge/cryodrgn_empiar
But there are some questions:
- Error occurs when loading the provided `.star` file,…