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1. The issue is found by exporting the network generated by PathLinker to GraphSpace. The result graph does not apply the correct background color (yellow/light-blue in this case) mapping for the sour…
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I'd like to save the node status whether the node is collapsed or not in json data, and then restore it to the visualized graph with keeping the collapsed status. When using some libraries "collapsed"…
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All our pages are currently object-centric (geme, ontology term, etc). We would like to have an association centric page.
```
/annotation/:id
```
We have these in golr as the id field (e.g `/solr/go…
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At the moment I write test for the methods of the graph class and discovered two issues that's not easily solveable for me without to rewrite a lot of stuff. I use the fixed version from #176.
Firs…
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Hi, I was trying to build a cystoscape graph, for a package "pyeed" (bio-informatics) we are developing, and I think I found a bug.
I am working from a Docker Container (https://github.com/PyEED/Py…
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I am trying to animate a graph using ipywidgets but the output is flickering.
Is there a native way to embed the widget in ipywidgets? I am trying to figure it out from the docs, but they seem to b…
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When attempting to save a network generated on a trajectory, I receive the following error:
```
Traceback (most recent call last):
File "/home0/martinw3/anaconda3/envs/pymol2/lib/python3.9/site…
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The current code graph page was written pretty hastily; it consists of a patchwork of JS code using web-ready libraries to plot the graph and offers no user-friendly means of navigating the graph.
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In GitLab by @mgimenez on Oct 6, 2022, 09:48
A while back @mcastril asked me to look into the graph visualization in the GUI. I Learned some techniques in one of my master's subjects which could be u…
kinow updated
6 months ago
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We probably want to replace `cylc graph` with web technology too, not just the control GUI graph view.