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Hello,
I am having issues running xCell using the Charoentong signatures. This analysis won't run on the webpage and produes the error below. If I select the xCell signatures and use the same data…
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Hello,
I am using the below script to load pre-saved DeSeq normalised count files for comparative co-expression analysis, but I keep getting the below error after read_data(...). Is there something…
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Describe the bug
Currently we have 2 options to create a boolean logic expression
* Entering individual i/p …
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In https://dart-review.googlesource.com/c/sdk/+/389590, I've added documentation to the `FlowAnalysis` class explaining the assumptions flow analysis makes about the order in which its client visits A…
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Depends on https://github.com/microbiomedata/nmdc_automation/issues/222
logic will need to be added to decide what workflow component to run for nmdc:MetatranscriptomeExpressionAnalysis.
nmdc:Me…
aclum updated
1 month ago
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### BioProject Checklist:
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- [ ] PRJNA526626
- [ ] PRJNA567655
Follow the [Gene Expression Protocols](https://github.com/mestato/statonlabprivate/wiki/Gene-Expression-Analysis-Las…
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### BioProject Checklist:
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- [x] PRJNA550508
- [x] PRJNA529179
- [x] PRJNA528770
- [x] PRJNA524691
- [x] PRJNA521303
- [x] PRJNA516950
- [x] PRJNA508364
- [x] PRJNA488534
- [x…
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In the preliminary version of the practical 1, I try to cover following topics:
- [ ] Introduction to Imaging-Based Spatial Transcriptomics (Xenium Platform)
- Overview of Xenium technology and it…
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# Changelog
* uns (Dataset Metadata)
* Updated the requirements for `spatial` to include descendants of _Visium Spatial Gene Expression_.
* Updated the requirements for spatial['is_single']…
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Dear developer,
We would like to perform TWAS analysis on a plant population. Our data consists of phenotypes, whole-genome gene expression levels, and genotypes for each sample.
We do not have …