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When using RepeatMasker for repeat sequence annotation, I encounter an "exec failed" error with no other error messages provided. Additionally, I cannot find the generated directories /RM_1930076.TueJ…
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Hello,
I've been trying to use wgd V2 to calculate a Ks peak
I've taken a subset of my CDS (~3K sequences)
When I run
```
wgd dmd subset.fasta
```
I get:
![Screenshot 2024-06-25 at…
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This request works fine:
[https://lapis.cov-spectrum.org/gisaid/v2/sample/alignedNucleotideSequences?accessKey={accessKey}&country=Switzerland&DateMonth=5&limit=3](https://lapis.cov-spectrum.org/gisa…
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Hi guys!
This is a really amazing tool! Thank you very much for it. The AGP export is great, but I'm wondering if you have any suggestion on tools to get a new fasta with the exported AGP?
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Hi Yang,
Thank you for this great tool! We are interested in organizing subcellular localization of tens of thousands of lncRNAs. But it seems that submitting to the web version of the tool doesn't …
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nextflow run hoelzer-lab/ribap -r 1.0.0 --fasta "/home/emma/campy/project_campy/sequences/fasta/*fasta"
Please after changing to the above command on conda to suit my profile. I am not still able …
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Hello,
I am trying to run homoplasyFinder (R) on set of whole genome multi-fasta alignment. The file have gaps. I run to the following error. If feedback on the wright way would be helpful.
```
…
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@Deeptivarshney
Ok, looks like there are only a few remaining minor inconsistencies, perhaps this is intentional/expected/ok, in which case please ignore and close this issue again, but otherwise …
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Hi,
I'm trying to create a database before running a cluster analysis, however I'm getting a "Fasta entry 0 is invalid" error.
I have tried creating databases in another fasta files and there's n…
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Hi,
Is there a way to disable FASTA and FASTA of all hits to prevent to download the assembly?
Thank you in advance,
Michal