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Clumpify: https://jgi.doe.gov/data-and-tools/bbtools/bb-tools-user-guide/clumpify-guide/
MZPAQ: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6547476/
GTZ: https://www.ncbi.nlm.nih.gov/pubmed/2929729…
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I'm trying to run BCALM on a very large database and I keep getting errors that look like:
```
mem: [ 100, 91622, 92822] MB EXCEPTION: Pool reserve() failed for 576716800000 (+ 1600 extra for 36 cor…
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Is it possible to obtain GFA output from the assemblies created by this pipeline?
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First of all, thanks for the tools you developed, the extensive tutorials and the fast response. You people rock.
This is not a bug example but rather some doubts regarding the tool.
In our …
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Correction:
Actually, all three produced different results.
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Hello,
I compared the outputs from DSK to the ones generated by [JellyFish](https://gi…
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hi! I'm having problems installing sgc on a fresh ec2. This could be user error.
AMI: Ubuntu Server 20.04 LTS (HVM), SSD Volume Type
Instance Type: r4.large
Followed installs here: https://spac…
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lala
[0.0%] Computing k-mer spectrums [Time: 0:00:00]A job failed (simka_test_tmp/simka_database/kmer_spectrums/A/), exiting simka
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Hello, I am rtying to run kmdiff on our cluster but it difficult. I notably encounter this strange behavior: kmtricks processes super kmers and counts partitions but does not write them on disk, leadi…
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Hello,
I would like to use BrumiR to identify small RNAs in a species without a reference genome (thanks for developing BrumiR), but get the following error during compilation:
~/brumir$ make al…