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GATB
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gatb-minia-pipeline
GATB Minia assembly pipeline
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OSError: [Errno 17] File exists
#32
mergi-2674
closed
1 year ago
1
BESST: error: argument -orientation is required
#31
Inexperiencedresearcher
opened
3 years ago
3
ZeroDivisionError while running BESST
#30
cimendes
opened
3 years ago
1
Question about input file type
#29
YuanwenGuo
closed
3 years ago
2
Release package?
#28
levlafayette
opened
3 years ago
0
Flag to remove intermediate files
#27
bstamps
opened
4 years ago
4
fix #25
#26
cimendes
closed
4 years ago
0
BESST: error: unrecognized arguments: fr
#25
cimendes
closed
4 years ago
3
GFA output
#24
ekg
opened
4 years ago
1
920: syntax error in expression (error token is "920")
#23
osowiecki
closed
4 years ago
1
Error with `make test`
#22
nylander
closed
4 years ago
3
Add version info on prerequisites
#21
nylander
closed
4 years ago
1
Combining multiple libraries
#20
harish0201
closed
4 years ago
5
hdf5 issue - unable to open file
#19
Krannich479
closed
4 years ago
5
create a system link to the contigs of the latest k iteration
#18
Krannich479
closed
4 years ago
2
Problems with assembling the data beyond kmer 127 and other queries.
#17
harish0201
closed
5 years ago
4
Execution of 'perl tools/sga-deinterleave.pl'
#16
Shirley-Q
closed
4 years ago
4
Problem with BESST in the pipeline
#15
xbarvazx
closed
4 years ago
12
gatb-pipeline requires a Linux 64 bits system
#14
anmwinter
closed
4 years ago
2
Patch for issue #12
#13
sletort
closed
6 years ago
1
make test failed and number of cores not limitable?
#12
jvollme
closed
4 years ago
5
Rustine
#11
sletort
closed
7 years ago
2
Bloocoo results used only once in the first minia iteration
#10
sletort
closed
7 years ago
2
Add besst_iter option
#9
sletort
closed
7 years ago
1
Error with samtools in `make test`
#8
ppericard
closed
8 years ago
1
Completed installation step
#7
ppericard
closed
8 years ago
1
test if bwa version is high enough
#6
rchikhi
closed
4 years ago
0
print minia version in command line help
#5
rchikhi
closed
4 years ago
0
check if -out is a folder (it shouldn't be!)
#4
rchikhi
closed
4 years ago
0
warn user is not enough free memory
#3
rchikhi
closed
4 years ago
0
--no-error-correction needs to appear in the command line parameters help
#2
rchikhi
closed
8 years ago
0
save the stdout to a [prefix].log.txt file
#1
rchikhi
opened
8 years ago
1