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## Summary
In syllabus.Rmd there was a description of how students will evaluate the intro_to_r course at JHU. In #14 this was removed.
What should be told to the students about how they can e…
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At the moment it is a little clunky, tedious and a bit opaque to access the regional data imported using the JHU and Google wrappers. It would be really nice to improve access to this data on the same…
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JHU CSSE said
> [We will no longer provide recovered cases.](https://github.com/CSSEGISandData/COVID-19/issues/1250)
......☹️
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while tormes-setup there is no conection with the web
Connecting nto ftp.ccb.jhu.edu (ftp.ccb.jhu.edu) \128.220.174.63\ :21...failed: Conection timed out
I think that since 2020 the downloading of…
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We now have had ~40 clients from many of the leading research institutions. I think this is a big selling point when pitching new clients so I would like the website to display this easily and at a gl…
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Hi WGlab,
I'm using `convert_bim_allele.pl` to fill the missing alleles in my data with the next command.
`convert_bim_allele.pl --replacezero --intype top genotypes.clean.bim OMNI_chip.snptabl…
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one issue i noted was that the link to the checkM database changed and the autoupdate function doesn't work anymore (probs for that reason)
also, kraken won't build on MARCC for whatever reason. I …
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Suppose we want to tweak `arx_forecaster()`. We probably can't just preprocess the inputs or postprocess the outputs; we want to modify the `epi_workflow` involved. It seems natural to want to copy-…
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Dear Chris,
I am unable to download genotype_genome_20180128.tar.gz, either using the install script or using wget. I cannot connect to ftp.ccb.jhu.edu (ftp.ccb.jhu.edu)|128.220.174.63|:21... Is th…
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Thanks for the banger article! The good people at John Hopkins CSSE also maintain a COVID dataset. Among other things, it is:
* More useful for China, due to case definition shenanigans being correct…