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### Problem/New Plotter
When joining two main canvases in a row or column, the specified size of the second canvas appears to be ignored along one dimension.
For example, if we have
```
data1 = …
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There seems to be a dearth of community detection algorithms in the current Graphs.jl. Hopefully this can be remedied in the future, and to that end I thought I'd list the ones that NetworkX [currentl…
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Hello,
I have been working with scGPT for the last week and I am studying currently the GRN part. By running the Tutorial_GRN notebook, and downloading the data/model in the links provided, I am un…
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Hi,
I'm trying to run the find_gene_modules() function following the tutorial https://cole-trapnell-lab.github.io/monocle3/docs/differential/#branches from "Finding genes that change as a function …
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Hi,
I have few queries regarding scanpy.
1. As scanpy is using Louvain Leiden algorithms for clustering which optimize modularity 'Q', so how we can access and print modularity funciton?
2. R…
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The following command
`java -cp ~/Bioinformatics/networkanalysis/build/libs/networkanalysis-1.1.0-5-ga3f342d.jar nl.cwts.networkanalysis.run.RunNetworkClustering -q CPM -m 1 -w -o /tmp/edges_clusteri…
ghost updated
3 years ago
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Hi!
I was playing a bit with spikecomponents, and I was wondering if someone was already working on it, or if it could be worth it that I add a clustering class (https://github.com/SpikeInterface/s…
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Hi all,
I was wondering whether scVI dimensions can be used with miloR. Specifically, each cell is transformed into a low dimensional latent vector of normal random variables. The issue I see possi…
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## Template for bug reports
* JASP version:
* OS name and version:
* Analysis:
* Steps to reproduce:
## Template for enhancement requests
* Enhancement:
* Purpose:
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Hi @evanpeikon
Thank you for sharing this analysis. Interestingly, I get similar numbers of cells and genes, but I don't transpose the AnnData object. I end up with nearly identical numbers of gen…