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When running `python -m jcvi.compara.synteny mcscan Bbalcxl0706.bed Bbalcxl0706.Aan1.lifted.anchors --iter=100 -o Bbalcxl0706.Aan1.blocks.txt`, I met the error below:
```
[11:24:01] DEBUG Lo…
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Hi all,
I installed jcvi and lastal by conda. However, an error came up when run the below command,
I already install texlivefull in root account. Why the error of "Set text.usetex=False" is still h…
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Running
```bash
latex test.tex
```
with `latex` being a symlink to `pdftex` in `.../envs/bin/` (as introduced by #18) and `test.tex` being
```latex
\documentclass{article}
\begin{document}
\…
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Hello,
Can you please provide a manual file please?
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I get this error when running the script run2.sh my data is in the .fa/.gff format, what type of format data is best to use to start the analysis.
Thank You,
Dillon
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Lots of very useful tools in this repository, thanks for sharing! I'm wondering if buried in here somewhere is a graphics script that would draw a synteny map for gene models instead of entire scaffo…
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hello老师好，非常感谢您的团队开发了这个软件，我在尝试的过程中遇到了一个问题，希望可以得到您的指点：
我在装配好环境之后尝试跑了example1并且成功，然后我就用自己的mags开始跑，但是总是遇到这个问题： Error: InPut Genome Link 1-2 Info easy.link file Format wrong,pleas check it， 然后我打开了这个file发…
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Thank you for such a useful tool. I'm trying to accomplish a microsynteny view similar to this:
![MCScan_TDC_Vitis_Camptotheca_Ophiorrhiza_Gardenia](https://user-images.githubusercontent.com/53409202…
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Can this align multiple chromosomes? something like this?
If yes, please explain how.
![image](https://user-images.githubusercontent.com/50389451/213054148-beaf82d2-2943-4f16-9fc3-b07fb4a981bf.pn…
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Hello
Could yopu please provide pointers on how to trouble shoot this
I used the latest code from pip rather than bioconda and what used to work now doesn't. I think it may be a formating issue.
…