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Hi Dr. Axtell,
Thanks for developing this useful software!! I've been attempting to utilize shortstack4.0.3 for both known and de novo miRNA prediction for wheat sRNA data. However, I encountered a…
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Here are node categories from the merged monarch graph for nodes coming in from kg-phenio.
I think it might be a bit of a group effort to QC.
| category | prefix | …
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Despite being told that this wasn't important or possible to add forwarding information for deleted identifiers when reported it, PubMed now addresses this issue by providing forwarding links. This is…
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# AllClo
### Unification, harmonizations and validations of high fidelity MoClo genetic assembly standard expansions
Our objective is to create a standard expansion unifying all the previous ones …
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**Submitting author:** @JonnyTran (Nhat Tran)
**Repository:** https://github.com/BioMeCIS-Lab/OpenOmics
**Version:** v0.8.8
**Editor:** @arfon
**Reviewers:** @arfon
**Managing EiC:** Arfon Smith
**:…
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@lpantano @gurgese @ThomasDesvignes @mhalushka @mlhack @keilbeck @BastianFromm @ivlachos @TJU-CMC @sbb25 @phillipeloher
Hi all,
It will be a little long email, but please take 15 min to go over…
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Configuration file: db_main.toml
Description: miRDB is an online database for miRNA target prediction and functional annotations.
```toml
[db_mirdb]
source_url = "http://mirdb.org/download/miRDB…
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http://localhost:8080/api/match/jaccard?id=HP:0007280
```
ontologyUris:
- http://purl.obolibrary.org/obo/hp.owl
ontologyDataUris: []
dataTsvs:
- ./Hs_disease_phenotype.txt
curies:
# …
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Hi all again,
cc: @ThomasDesvignes @mhalushka @mlhack @keilbeck @BastianFromm @ivlachos @TJU-CMC
After giving some time to think, I realized we could ask slightly different for a solution the n…
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I have been looking into using the RNA-seq data but have some questions on the gene annotations for the V2-RNA-seq data that I get from running your GDC-prepare-function.
How do the 21022 genes tha…