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mhalushka
/
miRge3.0
Comprehensive analysis of small RNA sequencing data
MIT License
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Reference update
#102
Cristinex
opened
2 hours ago
0
mirge3 gets killed
#101
lchall08
opened
2 days ago
4
'bins' Error while running miRge3.0
#100
ChenSchiff
opened
2 months ago
4
Python bug
#99
Cristinex
opened
3 months ago
1
Bump scikit-learn from 0.23.1 to 1.5.0
#98
dependabot[bot]
opened
3 months ago
0
Issue running mirge3
#97
hopekro
opened
4 months ago
1
Trimming repeated nucleotides
#96
adamcatto
opened
5 months ago
2
Unmapped reads
#95
hamzaaitabbou96
opened
5 months ago
1
Samples with different adapters
#94
adamcatto
opened
5 months ago
3
Issues with counts and adapters
#93
VilainLab
opened
6 months ago
1
UnicodeDecodeError: 'utf-8' codec can't decode byte 0xab in position 286: invalid start byte
#92
johnjamespeter
closed
8 months ago
4
Does miRge3.0 restrict reverse-complement mapping?
#91
MilosCRF
closed
8 months ago
2
mirge3 killde
#90
voluptatis
opened
9 months ago
5
Use length of pureSeq to plot read length distribution and to compare to min_len in the cutadapt function for umi samples
#89
hy101
closed
8 months ago
0
Error while running miRge3.0
#88
CarolineWits
opened
10 months ago
3
Question about Read Length Distribution
#87
hy101
closed
8 months ago
3
UMI
#86
hamzaaitabbou96
opened
11 months ago
1
installation on mac OS
#85
rolfsoekilde
opened
12 months ago
16
Spike-In
#84
hamzaaitabbou96
opened
1 year ago
1
db versions
#83
knokknok
closed
9 months ago
7
differentially expressed hairpin miRNA
#82
mick42-star
closed
1 year ago
1
installation with mac os
#81
mick42-star
closed
1 year ago
2
Cannot set a DataFrame with multiple columns to the single column miRNA_cbind
#80
imranjesar
closed
1 year ago
3
Revert "Ambiguous alignment handling"
#79
arunhpatil
closed
1 year ago
0
Error when running miRge3.0: ValueError in summarize function
#78
shashankpritam
closed
1 year ago
6
Output bam not complete
#77
Glfrey
opened
1 year ago
15
miRge3.0 not accepting the path to mirge libraries
#76
imranjesar
closed
1 year ago
6
miRbase Annotation Discrepancies
#75
asucrer
closed
1 year ago
2
Ambiguous alignment handling
#74
Glfrey
closed
1 year ago
18
Numpy versioning issues
#73
Glfrey
closed
1 year ago
1
Question about SNPs and Library
#72
John-Drake
opened
1 year ago
9
Alignment behaviour query
#71
Glfrey
closed
1 year ago
8
Added exact miRNA output
#70
Glfrey
closed
1 year ago
2
Added ability to extract counts for exact miRNAs
#69
Glfrey
closed
1 year ago
1
Custom identifiers for tRFs
#68
RoseString
closed
1 year ago
2
Annotation database access
#67
Glfrey
closed
1 year ago
2
Add '.fq' and '.fq.gz' to accepted file extensions
#66
mckellardw
closed
1 year ago
3
miRNA reference database
#65
hamzaaitabbou96
closed
1 year ago
1
Conda wrong Bowtie version
#64
Glfrey
closed
1 year ago
2
AttributeError: module 'numpy' has no attribute 'bool'.
#63
Glfrey
closed
1 year ago
3
miRNA filtration question
#62
Glfrey
closed
1 year ago
2
Novel miRNA annotation hanging?
#61
Glfrey
closed
1 year ago
24
Resume error
#60
Glfrey
closed
1 year ago
3
Update doc for a link o a docker file
#59
bchatelet
closed
1 year ago
2
Wrong versions packages in the install doc
#58
bchatelet
closed
1 year ago
1
visualization.HTML output is empty
#57
TomRivas
closed
1 year ago
6
SNP fasta file (human_mirna_SNP_pseudo_miRBase.fa)
#56
taeyoungh
opened
2 years ago
11
Bowtie error
#55
sanatbhadsavle
closed
2 years ago
5
Log2FC Values Question?
#54
Samir-A
closed
1 year ago
2
Bam flag question
#53
bbeniah
closed
1 year ago
1
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