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After merging #127 we should look into #101 again. Reason: The tag statistics look different, after data cleaning.
It might also be cool to have the tag statistics on our website, e.g. as a word c…
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[Neuronal morphometry directly from bitmap images](https://www.nature.com/articles/nmeth.3125)
- Published: 29 September 2014
- Tiago A Ferreira, Arne V Blackman, Julia Oyrer, Sriram Jayabal, Andrew…
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https://www.biorxiv.org/content/10.1101/2024.06.06.597812v1
https://github.com/lahammond/RESPAN
Accurate and unbiased reconstructions of neuronal morphology, including quantification of dendriti…
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3D convolutions are important too!
Like 2D images in nature, 3D Volume data is very common, such as medical CT and MRI data, where voxels are uniformly distributed in 3D space.
The medical and …
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**Describe the bug**
Some text of plan is missing in .docx download of DMP
**To Reproduce**
Steps to reproduce the behavior:
1. Log in as Super Admin to DMP Tool
2. Go to this DMP (unsure if ha…
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**AIMS**
- Reconstruct images from 2D patches
- Run inference on microscopy data
**Preliminary questions**
- Deal with patch overlap for inference
**UPDATE**
- The loading of microscopy data…
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**Is your feature request related to a problem? Please describe.**
As discussed yesterday, sometimes it can be nice to have _a_ result file even if it is null, e.g. #1009. Wanted to crack open an iss…
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For some microscope modalities one collects 2D images, but it can make sense to still assign them a physical thickness along axis perpendicular to the 2D plane, e.g the axial extend of the PSF in ligh…
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**Background**
* our main product we have is called ZEN, which is a big SW platform to control microscopy and do image & data analysis
* it can be installed using a dedicated installer called ZMI …
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Is this HiP-CT technique [in use at the ESRF](https://www.esrf.fr/home/UsersAndScience/Experiments/StructMaterials/BM18.html) included in one of the existing terms? Like the PaNET01152 (propagation ph…