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### Context
Since https://github.com/nextstrain/augur/pull/1240, we support using arbitrary columns as the metadata ID column.
This column is then used as the sample `name` in the final output Auspi…
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I am building models for herpes virus(NC_006273)
```
3c6eca300124# ./v-build.pl --forcelong NC_006273 NC_006273
# v-build.pl :: build homology model of a single sequence for feature annotation
…
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Original issue here: https://github.com/hzi-braunschweig/SORMAS-Project/issues/1869
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### Current Behavior
1. Locations defined in the `source-data/geo_synonyms.tsv` are ingested with the [label column as the key in 3 dicts](https://github.com/nextstrain/fauna/blob/master/vdb/upload.p…
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### Context
GMP was removed from the final image in ce07dadb5f6e2786d6ad9eabef00745b501ed425. As @tsibley noted in https://github.com/nextstrain/docker-base/pull/93#discussion_r995162001:
> Gene…
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Hi,
There is no way that we can identify the original image of any augmented chickenpox images. Without this, we can't split the chickenpox dataset into the train and test split. Could you please …
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Hi, I'm using Unicycler in my pipeline and using the gfa python package to parse the .gfa file unicycler produces to assist with assessment of the final assembly. I've noticed in a few of my .gfa file…
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## What were you trying to do and how can we improve it?
Shutting down the federal government shutdown to slow the spread of the virus and stopping the virus spread of COVID/Monkeypox and Omicron Va…
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### Context
Once we've completed #32, we can use strain names to deduplicate sequences.
This is necessary in case different groups sequence the same virus or if sequences are generated from differe…