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I have some code that can be used to identify outliers in multivariate space. I could see this as a way to combine results from multiple test statistics in genome scans (i.e. FST, genetic-environment…
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The new `DataGeometry` objects allow users to apply the same sequences of operations (that were applied to old data) to new data. However, the parameters of those transformations are currently fit an…
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In principle this should be easy. And we can hopefully start reasonably simply. But then it is likely to expand.
The obvious index is of ENSO. We need to look for a consistent and reliable sourc…
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This follows largely from issue #7808
I am happy that the system from the Describe and Model menus are going to consistently produce objects, most of which are stored in the data book.
Here are…
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I've written a model that should be able to simultaneously control for and assess alpha diversity, overall beta diversity, and individual differential abundances and prevalences. I'd like to test it o…
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Hi Julien,
I was wondering if you could help me understand something about the residuals from the output of mvgls. If I do, for example, `Y~1`, where Y is a matrix of traits, and fit mvBM, I get ou…
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In the training data, we can determine the tumor's center using its label, and then crop the images based on this central point. However, the test data do not have labels. How can I pre-process the te…
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We observe inflated false positives when using rank 1 prior covariance matrix in mash. The reason is due to the break down of lfsr. (The assumption of rank-1 is not explicit specified in the mash mode…