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When processing iSIM + BF data, I have found the need for a function to rename channel names. So far, since I have had to do a crop, I rename the channels there, but it would be nice to have a CLI fun…
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`ngff-zarr -i "*_C1.tif" -c 32 --memory-target 4GB -o ome-ngff.zarr
`
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We are making progress with defining a specification for a collection of Images at https://github.com/ome/ngff/issues/31
and with generating a collection of OME-NGFF Images (export from OMERO) at htt…
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Steps needed on idr-next for NGFF upgrade.
NB: current checklist is for actions on idr-testing (newly redeployed on 21st May 2024)
Detailed workflow is at https://github.com/IDR/mkngff_upgrade_scr…
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To avoid re-importing Images when updating data to NGFF, we want to create a new Fileset for the NGFF data, and replace old Filesets.
Testing workflow:
Imported png:
https://merge-ci.openmicros…
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Hi there,
I've managed to run
1. [import_ome_zarr](https://github.com/fractal-analytics-platform/fractal-tasks-core/blob/main/fractal_tasks_core/tasks/import_ome_zarr.py)
2. [drop_t](https://gith…
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The image specification (`multiscales`) must define the origin, either w.r.t. pixel center or corner.
@lassoan summarized this well in https://github.com/ome/ngff/pull/85#issuecomment-1026030204:
…
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New design discussed here: https://hackmd.io/EKGHONTUS4usTOEsj4k3oQ
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Context: We were discussing OME-NGFF usages recently with @tischi and I noticed we were going in somewhat separate directions on this topic. I’d like to start the broader discussion to see where the O…
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https://blog.daliansky.net/BCM94360Z4-m.2-NGFF-interface-four-antenna-notebook_small-host-dedicated-black-Apple-wireless-network-card-driver-tutorial.html
【黑果小兵】BCM94360Z4 m.2 NGFF 接口四天线笔记本/小主机专用黑苹…