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Hi,
I've been using OMETIFF with Images to read in some ome.tiff files. I initially had been using v0.3.5 which was correctly reading my files in. However, I recently updated to v0.4.5 which seems …
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Cockoit only currently deals with .dv files, pretty obscure. We should consider alternative file formats, the most promising I think is the ngff which has a python library implementation and will stor…
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**Dependency Repos**
- [ ] ome-jai (https://github.com/ome/ome-jai)
- [ ] ome-poi (https://github.com/ome/ome-poi)
- [ ] ome-metakit (https://github.com/ome/ome-metakit)
- [ ] ome-mdbtools (http…
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When I run `Nuclei_localization.py` I get the following error.
```python
bioio_base.exceptions.UnsupportedFileFormatError: BioImage does not support the image: 'https://allencell.s3.amazonaws.com/ai…
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### Discussed in https://github.com/libvips/libvips/discussions/3516
Originally posted by **jstriebel** May 30, 2023
It would be great if libvips could support [Zarr](https://zarr.dev), and po…
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Hey there,
I had a question regarding the writing of pyramids with more than 3 channels. In my case, these are multiplex immunofluorescence images with ~20 channels per magnification layer.
When…
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as can be seen in this image there is an isolated ome zarr file that had a bad name. the corresponding json file was ok.
![image](https://github.com/dandi/dandi-cli/assets/184063/5c0b18e6-f2ce-4362…
satra updated
3 months ago
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Hi @serrob23,
This is a great package and I have used it for false coloring small IF tiff images to DAB.
I know that this wasn't the intended purpose, but I was wondering if you had any advice …
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https://www.openmicroscopy.org/artwork/ only provides svgs for hot-linking. There are pngs specifically for twitter & facebook but not as part of the artwork files.
Also: list RGB colors for the lo…
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The recent work of https://github.com/ome/omero-blitz/issues/73 revealed another scalability issue when importing large filesets into OMERO.server.
Synthetic datasets of varying number of files can…