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Hi,
I am using SnPM with the following setup:
alpha = 0.05;
two_tailed = true;
snpm1 …
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$p$-values are currently coarsely coded in the tables as the first digit of $\max(\lg(1/p))$, where only the best algorithm is annotated. When we post-process more than two algorithms, we compute all …
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1. Fix "< 325" into something better
2. Develop some sort of sorting arrangement for all the p-values less than -325 - e.g. by the size of the overlap.
3. Change "p-value" into "adj,p"
4. Add Fisher…
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Dear peers
I am in complete ignorance of p-value.
"Is it the value of related Gausian function in that point?"
I was wondering whether someone could help me with this desperate problem
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# The gwas produces identical p-values at the end of my run(s).
GEMMA 0.98.3 (2020-11-28) by Xiang Zhou and team (C) 2012-2020
mdtr_1 = Plink binary ped file format
host_selectivity.fam = mean …
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Can I set more than one P value?
I saw the "cut" argument but I couldn't set more than one value
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https://github.com/wikpur/Spacial-Econometrics-Project/blob/f12e530994bb4025f811a1ba6b30d68c48c33c41/Spacial-Econometrics-Project.Rmd#L303
@rsbivand
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Hi,
I'm trying to obtain the pvalue of the host prediction working in linux but I'm not sure how to do it
I have my phages of interest (PI), potential hosts (H) and a group of phages that I'm su…
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Hi William,
first o all, thanks for this nice great project. I'm using the Passig Bablok regression and want also acquire the test-statistics. I found the most of them like slopes and intersects, but…
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Hi,
Shouldn't the test statistics for the LLR be 2*LLR in mll_results['pval'] = 1 - stats.chi2.cdf(mll_results['LLR'], df=1), so that ['pval'] = 1 - stats.chi2.cdf(2 * mll_results['LLR'], df=1)?