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INFO - general - Read 1 molecules from PDB file frame_50001.pdb
INFO - step - Guessing the bonds.
INFO - general - 8 molecules after guessing bonds
INFO - step - Repairing the graph.
…
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如图,Taboolib 内置的不正确命令提示没有正确输出格式化文本, 而是 `§`
![image](https://github.com/TabooLib/taboolib/assets/69967436/0b8449e2-3054-4c8b-a540-5e54eca019f5)
## 其他信息
Velocity 版本:3.3.0-SNAPSHOT (git-2d015cdf-b3…
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- [x] The process of adding nodes is slow, we should figure out what part is slow (i.e. adding edges, getting current positions etc). There might also be a built-in delay in the addCyNodes function. -…
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插件版本:adyeshach-2.0.0-snapshot-10
核心版本:arclight-forge-1.19.2-1.0.1
启动时关键错误日志:
```yaml
[281月2023 18:15:53.216] [ForkJoinPool.commonPool-worker-7/ERROR] [net.minecraftforge.eventbus.EventSubclassTran…
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I am testing out the 1F slice-PASEF method from your preprint and have the following questions...
1. I am wondering what the best practices are to run this in the DIA-NN software in terms of param…
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Hi Vadim,
I generated a library for **phosphoproteomics** data analysis using DIA-NN 1.9. However, I’m not sure whether I should do some preprocessing before using the generated `report-lib.tsv` in a…
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This would allow transitions from proteoforms identified with ET multimod sets that remove one PTM (e.g. dimethyl as {methyl, methyl} could have a transition -14 Da that removes a methyl).
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In GitLab by @nonnominandus on Jul 16, 2021, 17:37
It would be great if all found PTMs plus possible ones could be annotated in the result HTML. Of course this would include glycosylation sites but c…
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I was wondering if there is documentation available as to which sequence notation is used for the prsm sequences in the toppic result files?
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Hi Guys,
is it possible to generate new XML databases from search results? i'd be especially interested in "beefing up" the uniprot XMLs with new modification sites (especially for O-glyco).
Che…