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Gnos property is not shown as diked. It should be.
What about areas east of 101 on the north side of the river? These are tidally restricted due to… tide gates? Restrictive culverts?
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Hi
This is my error which i havent had previously. Heres the screenshot.
Please review usage info for accepted parameters.
warning, cmd: ERROR, don't recognize parameter: --no_salmon
/nobacku…
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Hi, such a fantastic RNA-seq analyze tool Salmon! Recently, I used Salmon to analyze transcript level expression and the information of my analyze tool:
- Salmon: v1.6.0 (install from bioconda)
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![image](https://user-images.githubusercontent.com/7449908/189211927-3bac4915-d3c8-475c-913d-d52eb96a7bde.png)
## Ingredients
- 2 tbspbutter
- 2 cloves garlic, chopped
- ½ medium onion, choppe…
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Collect data on rivers (Salmon riviers) + all data related to habitat
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When I run my own data for alignment with Star, I encountered a bug. I am debugging now to see what happens. I noticed that Salmon as the quantifier tool, is not affected at all. It …
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Hello,
I am using transrate to quantify the quality of de-novo assemblies. This is the command I am running.
nohup /work/LAS/rpwise-lab/sagnik/softwares/transrate/transrate --assembly /work/LAS/…
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As is, starseqr always requires fatqs even if a STAR alignment is provided. If we modify the salmon call to do alignment mode in this scenario we can bypass the fastq requirement
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Hello,
I want to known if it's possible to view salmon quant.sf output in a browser ( IGV, JBROWSE) according to a fasta reference genome and gff file of predicted gene used for salmon mapping.
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I am using Ubuntu on my laptop.
I installed salmon by the command:-
conda install --channel bioconda salmon
I downloaded the SalmonTools scripts from
git clone https://github.com/COMBINE-lab/Salm…