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**Have you checked the FAQ? https://github.com/google/deepvariant/blob/r1.6.1/docs/FAQ.md**:
Yes
**Describe the issue:**
I can't pull the container using singularity.
**Setup**
- Operating …
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Hi,
On our infrastructures, we choosed to switch to Apptainer and since we can't access to the Sylabs library of images anymore.
Can you share your Singularity defination file with me ?
Thanks
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```julia
function calc_exclusion(as, ϵs)
regions = zeros(Float64, (length(as), length(ϵs)))
Threads.@threads for i in eachindex(as)
a = as[i]
for (j, ϵ) in enumerate(ϵs)
…
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Hello,
I am trying to run RFDiffusion in my HPC with Singularity (I don't have Docker).
I generated the SIF image with `singularity build rfdiffusion.sif docker://stephenturner/rfdiffusion`.
…
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### Operating System
macOS
### Other Linux
_No response_
### Workflow Version
v23.04.3
### Workflow Execution
Command line (Cluster)
### Other workflow execution
_No response_
### EPI2ME Ver…
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This is a followup to the closed issue as noted in #291, which can be worked around using the [nf-core pangenome workflow](http://nf-co.re/pangenome/). I have separately confirmed this using the same…
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Hi, run command :
singularity exec -B $PWD:$PWD braker3.sif braker.pl --useexisting --species Brachymystax_lenok1 --genome ./s3_repeats_screen/A1.genome.masked.final.fasta --prot_seq ./s1_input_da…
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Hi,
I want to use it in the singularity containers but when I use the demand like:
```
singularity pull docker://pyprophet/pyprophet:2.1.3
```
It is not working. Do you know the correct cod…
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Need to convert the existing docker container into a singularity container and provide it to users.
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## Bug report
with my `nextflow.config` like this;
```nextflow
singularity {
enabled = true
autoMounts = true
cacheDir = "/fsx/home/tools/containers"
}
process {
exec…