-
Hello,
I will list here a brief review of this artifact, so you could fix it in the future.
A cluster of 8 nodes x (2 CPUs Intel Xeon L5420, 4 cores/CPU, 16GB RAM, 298GB HDD) is deployed
- In…
-
### Motivation for the feature
In the past, several issues (#919, #1057) have been raised as a result of failed attempts to run ivadomed on Compute Canada, primarily due to version conflicts betwee…
-
The new command generator added in 7ef76b08b5e9b9e889f6da3c358aa35f5b64dea3 as part of #243 doesn't support phony targets. Looking at the Vivado rework as an example, almost all of its targets includi…
-
`parallelly::availableCores()` returns the number of cores available for multicore processing. R itself provides `parallel::detectCores()` for this. There is also the `mc.cores` option (default to e…
-
Is is possible to use a local HPC or GPU cluster? I understand that it works perfectly with AWS but what about when the use of AWS is not possible but there are other resources available? Can it be co…
-
Thank you for this program. I was told about it during PAG2020 and am finally trying it out now for my ONT/Illumina hybrid assembly (created using a minimap2/miniasm/racon/pilon assembly pipeline).
…
-
**Describe the issue**
I'm not sure if these are a singular problem or a series of problems. FWIW, I'm doing this on SLURM.
1. LtrPipeline: GenomeTools failed to run ltrharvest. Error code: 65536
…
-
we working on an HPC without root and network and I often get the following message, does this mean that my cache calls are failing.
we using the singularity method of task execution
```
cromwell-s…
-
We've had the idea to gather solr search stats for a long time. Once in a while resource utilisation stats came up as well.
I just wanted to start a discussion on how such statistics could be gathere…
-
I am trying to create a cluster with pre-existing hosted zone, but in a different account. The hosted zone is public and the IAM role attached to the EC2 machine which I am using to start a PC has rou…