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# Project title: Implement SpikeGLX gfix in spikeinterface
### Key Investigators
* Alessio Buccino
## Project Description
SpikeGLX provides the `gfix` tool to automatically detect and blan…
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Quick question: Kilosort 4 in a spikeinterface docker container took about 4hours to run on a 20min long Neuropixels dataset (Kilosort 2 on MATLAB on the same machine takes about 30 minutes), so I bel…
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Hi, I am using spikeinterface and kilosort 4 to process my data. When I open phy to do my manual curation, I'm noticing that the channel indicated in the cluster view never matches the channel with th…
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```python
import numpy as np
import matplotlib.pyplot as plt
import spikeinterface.full as si # import core only
import spikeinterface.extractors as se
import spikeinterface.preprocessing as s…
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Hello!
We just started using spikeinterface gui at our lab to avoid the long time it takes to export to phy. Some of the functionality seems particularly useful; kudos to the developers for making th…
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in the API spikeinterface.sortingcomponents.motion.estimate_motion, for "dredge_ap":
batch_size: int
"Size of batch for the convolution. Increasing this will speed things up dramatically on GPUs and…
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Hello,
When running kilosort4 via spikeinterface, `CUDA out of memory error` occurs immediately after the first clustering.
The error still occurs when setting `clear_cache = True`. But not when …
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A couple of recent sessions sorted with `SpikeInterface==0.99.1` have failed with the same error message, and it's not clear to me why (see `output` below).
I don't see the `spikeinterface_log.json`…
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Traceback (most recent call last):
File "D:\sjwlab\bxy\spikeinterface-main\examples\get_started\quickstart.py", line 64, in
sorting_KS2 = ss.run_sorter(sorter_name="kilosort2", recording=reco…
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Currently trying to process Maxwell HD MEA data with SpikeInterface and MS5. I was able to get the process started and did some light troubleshooting, but am stuck with two parameters that I can't see…