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Hallo FanHuan,
the BetaVersion as well as the latest version 2019 doubles the number of sequences in the header of the distance matrix file. This makes it unreadable for e.g. SplitsTree. The result …
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Just a small suggestion, nothing big.
I think `[this](https://github.com/IVS-UZH/RSplitsTree/blob/172a22dd2e9adb312b3cfcc658b73d798e028947/R/splitstree.R#L60
)` could be simplified by using
``…
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It took me a while to figure out what was going wrong when I was running custom_nexus(). It kept telling me that my tips and taxa weren't of the same length, but I knew that they were. Then I realised…
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Package now compiles out of the box! There will be a next ticket for its interface within Sage.
upstream tarball: https://polymake.org/lib/exe/fetch.php/download/polymake-3.0r2-minimal.tar.bz2
Onc…
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Hi,
Could you eventually make optional options where you could capture the boostrap files
- wbtl option | Like -wbt but bootstrap trees written with branch lengths. DEFAULT: OFF
which capture…
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VCF allows unlimited character length for sequence IDs, but apparently[ PHYLIP allows only 10](http://www.phylo.org/tools/obsolete/phylip.html). Would there be a way to force unique character names if…
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I'm struggling with understanding the usefulness of the Nexus data file.
As a record of the exact data that was used in the analysis, it should be part of the supplemental materials of the paper -…
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The .dst-file can be read by R, but not by SplitsTree. Meanwhile, I can open th enexus file with iqtree, but not with splitstree either.
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Hi,
It's there anyway to use this module to parse a distance matrix?
Thanks,
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we need an example script for @Maunus to see how the data can be converted to nexus or splitstree distances. I will place this in a folder `examples`.