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**Reported by kchris on 2010-06-12 00:00 UTC**
Hi,
There are some promoter motifs, e.g. the "A_box" that is part_of "RNApol_III_promoter_type_2" that are is_a children of "TF_binding_site", which is …
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https://doi.org/10.1101/099879
> Massively parallel reporter assays (MPRAs) are a method to probe the effects of short sequences on transcriptional regulation activity. In a MPRA, short sequences a…
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@PritiShaw can you grab the MeSH terms for the PMIDs in this file?
https://reactome.org/download/current/ReactionPMIDS.txt
There are many duplicates, so make a unique list. To the same exercise…
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https://doi.org/10.1101/172767 (http://www.biorxiv.org/content/early/2017/08/06/172767)
> Determining the binding locations of regulatory factors, such as transcription factors and histone modifica…
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We are working on annotation documentation for MF-to-BP relations and would like to assess the extent to which relations, other than 'part of', have been used to link MFs to BPs in Noctua.
We would…
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Hi,
I am interested in studying protein-nucleic acid couplings, like that of transcription factors and RNA binding proteins. I was looking at the plmc script and was wondering how I should go about…
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Hello CL Team,
This issue is related to issue #838 , please let me know if I misunderstand something here, thank you very much in advance
https://www.frontiersin.org/articles/10.3389/fimmu.2019.…
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hello , sorry to disturb you.
I saw the paper 'Inference of transcription factor binding from cellfree DNA enables tumor subtype prediction and early detection' said "The position was recalculated by…
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Hi,
Thank you very much for your Omnipath database.
Now I have some information about ligands and receptors, but I want to know what are the transcription factors and target genes downstream of…
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Hi @mariam16548
Today let's create a full-chromosome or maybe even whole genome study of a transcription factor (TF) with more length (and thus more binding complexity) that GATA1. We might exp…