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saezlab
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OmnipathR
R client for the OmniPath web service
https://r.omnipathdb.org/
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Is the omnipath server down?
#114
Tommygoe
opened
6 days ago
0
`kegg_pathway_annotations` fails with uninformative error
#113
danhalligan-la
opened
2 weeks ago
0
issue with get_progeny
#112
costibonf
opened
3 weeks ago
1
generate_homologs : No method for filter for class "list"
#111
Dalhte
closed
3 weeks ago
2
Error when running "net <- get_collectri(organism='human', split_complexes=FALSE)"
#110
YazDal
closed
1 month ago
1
Omnipathdb is down
#109
karJac
closed
1 month ago
1
Error when running "net <- get_collectri(organism='human', split_complexes=FALSE)"
#108
kasayadior
opened
1 month ago
1
Update README.md
#107
YanshiHu
closed
1 month ago
0
get_dorothea and get_progeny error
#106
MutluHamanakaLab
closed
1 month ago
11
Parallelization error when optimizing parameters for NicheNet
#105
tkapello
opened
3 months ago
0
Error in import_omnipath_annotations
#104
Megan0921
closed
3 months ago
1
500 Internal server error
#103
siddharthamantrala
closed
4 months ago
1
kegg_pathways_download returns fewer pathways
#102
cchen22
opened
4 months ago
1
OmniPath failling to install in GH action
#101
joan-yanqiong
closed
3 months ago
2
Orthology translation does not work: `oma_pairwise` fails with HTTP 503
#100
ZZQ-1117
closed
6 months ago
8
Error in get_collectri()
#99
virdzek-g
closed
8 months ago
0
wrong TGFB1-SMAD7 interaction
#98
adugourd
opened
9 months ago
0
Needs fix
#97
npalacioescat
closed
5 months ago
3
Installation error
#96
ndrubins
closed
9 months ago
3
Omnipath failing to install in GitHub actions.
#95
enblacar
closed
5 months ago
3
Error: Error installing package 'OmnipathR': when trying to install LianaR
#94
maximelepetit
closed
3 months ago
17
cannot open the connection to 'https://omnipathdb.org/resources'
#93
jtorrejon81
closed
11 months ago
2
connection problem
#92
ojikj2019
closed
11 months ago
2
import_all_interactions only shows transcriptional
#91
mschubert
closed
9 months ago
2
loading package failed
#90
Kiliankleemann
closed
1 year ago
1
Error when Testing the pipeline
#89
Mirable8me
opened
1 year ago
3
TIME OUT for import_intercell_network
#88
howtofindme
opened
1 year ago
6
Clarification about commercial licenses
#87
InesdeSantiago
opened
1 year ago
3
error when run import_omnipath_annotations
#86
FADHLyemen
opened
1 year ago
1
CellPhoneDB Version
#85
SimonDMurray
closed
1 year ago
2
get_collectri() and OmnipathR download not working
#84
nvokes
closed
1 year ago
4
CDK6 -> RUNX1 interaction should be consensus inhibition
#83
adugourd
opened
1 year ago
0
omnipathdb has expired certificate
#82
hrehrauer
closed
1 year ago
1
PDPK1 and PDK1 are mixed up
#81
adugourd
opened
1 year ago
0
Error Installing OmnipathR when trying to install liana
#80
rstorch01
closed
1 year ago
1
Error in retrieving interactions from Omnipath
#79
EugeniaRadulescu
closed
1 year ago
5
Unable to install LIANA because of omnipathr dependency
#78
joan-yanqiong
closed
1 year ago
2
How to get information about downstream target genes of ligands and receptors in cell interactions?
#77
qijt123
opened
1 year ago
2
Vinayagam et al. suppl: download fails from sciencemag due to lack of cookie
#76
j-bac
opened
1 year ago
0
How to get data on the interactions of all receptor ligands?
#75
qijt123
closed
1 year ago
4
genes lost in orthology_translate_column
#74
gabora
closed
1 year ago
3
Omnipath database
#73
chrkuo
closed
1 year ago
1
Wrong version packages
#72
Icekirakira
closed
1 year ago
1
error in homology_translate
#71
gabora
closed
1 year ago
1
error in dplyr mutate function within get dorothea during omnipath
#70
narmadabc
closed
1 year ago
3
OmnipathR.rdb' is corrupt
#69
beetlejuice007
closed
1 year ago
2
Collectri not found
#67
joan-yanqiong
closed
1 year ago
1
OmnipathR import functions mutate error
#66
D-Harouni
closed
1 year ago
1
Error in get_dorothea
#68
DylanPostmus
closed
1 year ago
6
object ‘homologene_download’ is not exported by 'namespace:OmnipathR'
#65
skylarsiwu0113
closed
1 year ago
1
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