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When using `PyOpenGL-accelerate`in version 3.1.5 from wheel there shown this warning:
```
OpenGL.arrays.numpymodule:Unable to load numpy_formathandler accelerator from OpenGL_accelerate
```
When…
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Ran detect_errrors.py on PDB 8faz and EMDB map 28961
detect_errors.py --pdb 8faz.pdb --map emd_28961.map --reso 2.3 -j 1
and it failed because of use of the deprecated (and now removed numpy.boo…
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Hi all,
I'm one of the developers on the UCSF ChimeraX team. We have a number of compiled extensions that we ship in ChimeraX, scattered across several modules. To facilitate our modules including…
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https://www.rbvi.ucsf.edu/chimerax/data/alphafold-jan2022/afspeed.html
I was trying to predict a 3200 a.a. protein on our cluster with 2 A100 80GB GPU. Base on the page above, 48 GB seems sufficien…
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"subtracting the density" in https://www.cgl.ucsf.edu/chimerax/docs/user/commands/fitmap.html#sequence
Code starts here:
https://github.com/RBVI/ChimeraX/blob/26c993ba96c5456a6f3468e2099cd8f039…
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https://www.cgl.ucsf.edu/chimerax/docs/devel/writing_bundles.html
> With ChimeraX bundles being packages as standard Python wheel-format files, they can be distributed as plain files and installed …
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SInce 1.4 the PyQT version is 6.
There is code in xmipp generating a pure python script (.py) that imports PyQT5. This works for chimerax versions older than 1.4
Facilitate a way to check which …
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A video tutorial on this process can be found here: https://www.youtube.com/watch?v=ZnXBa9RdliU
![Untitled video (2)](https://github.com/TomkUCL/SARS-CoV-2-Helicase-nsp13-Public-Antivirals-Virtual-…
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I come to this repo from https://www.cgl.ucsf.edu/chimerax/docs/devel/writing_bundles.html#bundle-sample-code. It is documented that "Because the sample code includes C++ source code." But there is no…
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Hi,
I am trying to download the ChimeraX, but the download page can not be opend, such like https://www.cgl.ucsf.edu/chimerax/download.html.
It seems all related website can not be opend, could yo…