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I'm trying to reconstitute the CPT4 vocabularies using the cpt4.sh file and am getting this error:
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Exception in thread "main" org.odhsi.utils.cpt.Cpt4Exception: Cannot process CONCEPT.csv file…
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Query: What genes are downed by Ruxolitinib?
PK: ab417e9e-cac8-45c8-a114-4f4d4514c038
We get results for JAK1, JAK2, and JAK3, but also at least "Janus Kinase 1" and "Janus Kinase 2".
It look…
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I'm on a fresh ubuntu 24.04 LTS server version.
docker installed separately.
used the curl install method.
everything seem to be okay.
however there are questions i dont understand.
4 digit p…
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@kanems we were hoping of directly important the MESH mappings from MedGen into Mondo, but it seems that they are not _exact_ in the strict sense.
Here are some examples provided by @twhetzel. A c…
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In our Team Expander Agent all-hands meeting today, it was pointed out that the current SRI node normalizer no longer seems to normalize `UMLS:C0699142` ("Tylenol") to the various nodes for acetaminop…
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I have installed Clamp but I don't have the UMLS component there even thought I have an UMLS username and password, any suggestion on how to add it? Thanks
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[Asset 362](https://github.com/NCATSTranslator/Tests/blob/main/test_assets/Asset_362.json) says the expected output name is `ACE inhibitors`. However, the output ID `PUBCHEM.COMPOUND:37056` is `Ethyl4…
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Posted on the UMLS website:
NOTE: The UMLS Terminology Services (UTS) sign in process is changing and action is required.
The UTS is moving from a username/password login to a service that allow…
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UMLS has a number of acronyms for its entities that are not the same as BioPortal acronyms. The internal PURL identifiers use the UMLS acronyms, and these resolve to the BioPortal acronyms (except for…