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Only 65% of the peaks have an `ele` tag and therefore are included in the `mountain_peak` layer.
Some mappers, like the OSM default map, would like to show peaks even if the have no name or elevation…
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Hi Taoliu,
I am comparing two transcription factor's peaks. I analyzed unique peaks, meaning peaks that had no overlap (0 overlapping bases) between the two TFs. I was also interested in differenti…
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**Describe the bug**
The graph (plot) may show amplitudes much lower than the actual amplitude
**To Reproduce**
Steps to reproduce the behavior:
1. Generate a mono, 1000 Hz sine tone, amplitude …
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```
- Add "tracking mode" to settings:
"Contours": CONTOUR
"Contours with outlines": CONTOUR | OUTLINE
"Contours with all peaks": CONTOUR | OUTLINE | PEAK_OUTER
"Contours with inner peaks": CONTOUR |…
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Hi,
Using hifiasm we got hap1.p_ctg 1001M, hap2.p_ctg 989M, which was larger than the genome size of our species(approximately 600M) . The contig number is 640 and 620, the contig N50 is ~8.8M…
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Hi team! I've been noticing some warnings showing up when doing the tunein step of peak calling direct infusion data through the findChromPeaks function. I know this is probably more in the area of th…
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As suggested by Attila:
The standard XCorr score uses only unique theoretical peaks, thus it filters out redundant theoretical peaks. If you need the same theoretical peaks which are used in the st…
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I noticed LBL was running extremely slowly on the drift file: this is because it does 20 iterations per file while 4 were enough before. I checked that the file quality is the same (since also APERO v…
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Hello,
I want to predict the TF binding sites using your example peak file. The reference genome is hg38, and the bed file is fox01_peaks.bed.
After processing peak file using command "python proc…