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Hi there, first of all thanks for sharing the code and I'm looking forward to your paper when it comes out. This is not an issue of your tool, but I would really appreciate your insight since you have…
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Hi SO,
Some of the INSDC /regulatory_class terms currently lack a match to an SO term. Since we'd like to map all terms to SO (see issue #378 for more background), can you consider making an SO ent…
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https://dx.doi.org/10.1101/041616
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Starting from e.g: https://github.com/hussius/deeplearning-biology or https://github.com/greenelab/deep-review select a set of models, rebuild and re-train them in Keras.
## Spreadsheet of models t…
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In preparation for ingesting epilogos tilesets, I tried converting two test epilogos BED files to multivec format using `conda` (Python v3.6.4) and `clodius` v0.7.4. The host is running Ubuntu Xenial …
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Two issues with this term:
1. I noticed that the definition of the term "**RNA polymerase II transcription factor complex**" seems too narrow. My recollection is that people also refer to the compl…
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In order to test the feature _regulatory exome_ I
1. Checked out the latest version of VPV (05813531ca8ec6abe640d344efbb5c0379b7b5e8).
2. Created a new project _test_reg_exome_.
3. Created v…
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Hi Zuguang,
Just found that now it supports for chromatin state data https://github.com/jokergoo/EnrichedHeatmap/issues/24 . for clustering, what clustering method and distance is used?
or could…
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_@agitter is no longer updating the outline, we are no longer accepting new sections_
Of course you should feel welcome to contribute to sections that already exist. We're also looking for people t…
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as identified in https://github.com/edamontology/edamontology/issues/292#issuecomment-314162572