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This is in support of the monarch project, but will also test the system and provide some good homologous test data.
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/rcavalcante/annotatr
REPOSITORY UPDATED to reflect soft…
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Hi,
Can GO please consider the following request related
to Molecular Function term #3705: RNA polymerase II
transcription factor activity, enhancer binding.
Currently the definition is "Functions…
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GO:0000155 two-component sensor molecule activity
no def
GO:0000156 two-component response regulator activity
no def
What is the difference between these two terms?
histidine kinases are response…
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This is related to the 'TF related' 14573 on the
annotation tracker.
Basically I am trying to get all of my general and
seqeunce specific TFs separated by function term,
(ignoring for the moment whe…
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The node 'transcription regulator ; GO:0030528' needs
sorting out - importantly, we need to decide what to do about
term 'transcription factor activity ; GO:0003700' - make
obsolete? See email arch…
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According to Paul Thomas, please rename the following:
- "Enhancer reporter data" to "Enhancer reporter gene assay"
- “Transcription factor binding site data” to “Chromatin modifier-associated region …
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Dear ‘hippie’ developers, Thanks for developing ‘hippie’! It is of a great interest for us to be able to discover enhancer–target gene interactions using Hi-C. Since our in-house data is based on curr…
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I have 2 mappings to isomerase, neither of which appear to be isomerases
i) O42958 Topoisomerase associated protein (Predicted).
and
ii) Q8NIL3 enhancer of RNA-mediated gene silencing
the mapping…
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Another request from the UK curator pre-jamboree meeting...
PMID:15060134 shows that Drosophila Nipped-B regulates transcription via an enhancer by structurally facilitating enhancer-promoter communi…