-
-
In the process of annotating projects, I encountered an expression method of age in https://web.expasy.org/cgi-bin/cellosaurus/search?input=PubMed=22278370, which uses 40Y, 40Y5M, 40Y5M2D to express t…
-
The Swissmodel SARS-CoV-2 models may be useful to link:
https://swissmodel.expasy.org/repository/species/2697049
We could link both "all" models (which are useful to browse) as well as specific hi…
-
Algorithms to find pangenomic clusters are based on "set theory". Proteins are classified as members of the **core, shell or cloud clusters** according to their **prevalence** in the proteomes analyze…
-
Why is an EC number considered as cross-reference for a gene?
This doesn't make sense to me. Consequently, I think lines 161-175 of `Gene/MetadataSection.js` (below) should be removed.
```
if (p…
-
### Setup
I am reporting a problem with Biopython 1.76, Python 3.7.4, and operating
system as follows:
```from Bio import ExPASy
from Bio import SwissProt
handle = ExPASy.get_sprot_raw('B5ZC0…
-
### Setup
I am reporting a problem with Biopython version, Python version, and operating
system as follows:
3.5.5 |Anaconda custom (64-bit)| (default, Mar 12 2018, 23:12:44)
[GCC 7.2.0]
CPytho…
-
Return more metadata from this endpoint:
https://api.datanator.info/reactions/kinlaw_by_name/?substrates=Glucose&products=Glucose&_from=0&size=1000&bound=tight
Metadata we could potentially integr…
-
In the /reactions/kinlaw_by_name/, the query returns cofactor information. The frontend used this to link to the corresponding metabolite page. Now that we switched the querying to inchi for metabolit…
-
build ec collection, store cofactor info